Binding
of the SARS-CoV-2 S-glycoprotein to cell receptors is vital
for the entry of the virus into cells and subsequent infection. ACE2
is the main cell receptor for SARS-CoV-2, which can attach to the
C-terminal receptor-binding domain (RBD) of the SARS-CoV-2 S-glycoprotein.
The GRP78 receptor plays an anchoring role, which attaches to the
RBD and increases the chance of other RBDs binding to ACE2. Although
high levels of reactive oxygen and nitrogen species (RONS) are produced
during viral infections, it is not clear how they affect the RBD structure
and its binding to ACE2 and GRP78. In this research, we apply molecular
dynamics simulations to study the effect of oxidation of the highly
reactive cysteine (Cys) amino acids of the RBD on its binding to ACE2
and GRP78. The interaction energy of both ACE2 and GRP78 with the
whole RBD, as well as with the RBD main regions, is compared in both
the native and oxidized RBDs. Our results show that the interaction
energy between the oxidized RBD and ACE2 is strengthened by 155 kJ/mol,
increasing the binding of the RBD to ACE2 after oxidation. In addition,
the interaction energy between the RBD and GRP78 is slightly increased
by 8 kJ/mol after oxidation, but this difference is not significant.
Overall, these findings highlight the role of RONS in the binding
of the SARS-CoV-2 S-glycoprotein to host cell receptors and suggest
an alternative mechanism by which RONS could modulate the entrance
of viral particles into the cells.