Biochemical and structural studies indicate that electrostatic and hydrophobic interactions are critical in the formation of optimal complexes for efficient electron transfer (ET) between ferredoxin-NADP + reductase (FNR) and ferredoxin (Fd). Moreover, it has been shown that several charged and hydrophobic residues on the FNR surface are also critical for the interaction with flavodoxin (Fld), although, so far, no key residue on the Fld surface has been found to be the counterpart of such FNR side chains. In this study, negatively charged side chains on the Fld surface have been individually modified, either by the introduction of positive charges or by their neutralization. Our results indicate that although Glu16, Glu20, Glu61, Asp65, and Asp96 contribute to the orientation and optimization of the Fld interaction, either with FNR or with photosystem I (PSI) (presumably through the formation of salt bridges), for efficient ET, none of these side chains is involved in the formation of crucial salt bridges for optimal interaction with FNR. These data support the idea that the FNR-Fld interaction is less specific than the FNR-Fd interaction. However, analysis of the reactivity of these mutated Flds toward the membraneanchored PSI complex indicated that all mutants, except Glu16Gln, lack the ability to form a stable complex with PSI. Thr12, Thr56, Asn58, and Asn97 are present in the close environment of the isoalloxazine ring of FMN in Anabaena Fld. Their roles in the interaction with and ET to FNR and PSI have also been studied. Mutants at these Fld positions indicate that residues in the close environment of the isoalloxazine ring modulate the ability of Fld to bind to and to exchange electrons with its physiological counterparts.Electrostatic and hydrophobic interactions play an important role in the formation of optimal complexes for efficient electron transfer (ET) 1 between proteins (1, 2). In the photosynthetic ET chain, electrons are transferred from photosystem I (PSI) to ferredoxin-NADP + reductase (FNR) via ferredoxin (Fd). In this system, specific recognition and binding between FNR and Fd are required for efficient ET (3-7). Thus, electrostatic interactions orient the proteins for formation of an initial complex, whereas hydrophobic interactions are critical in the formation of the optimal complex for ET (5,6,8). The structures of the FNR-Fd complexes from Anabaena and maize have been determined by X-ray crystallography (9, 10), confirming the importance of the nature of the interactions that was established by biochemical studies. Thus, biochemical and structural data indicate that Fd binds in a concave cavity around the FAD group of the reductase, where residues Lys75, Leu76, and Leu78 on the FNR surface play a crucial role in complex formation, by interacting with the side chains of Glu94 and Phe65 on [11][12][13][14].Flavodoxins (Fld) are small R/ flavoproteins that contain a noncovalently bound FMN cofactor. In cyanobacteria and certain algae, Fld is synthesized instead of Fd when the or...