We evaluated the acute and chronic toxicity of nitrate to juvenile fat greenling Hexagrammos otakii. The 24‐, 48‐, 72‐, and 96‐hr LC50s of nitrate to 1.91 ± 0.7 g greenlings were 2,741, 2,413.5, 2,357.6, or 2,339.2 mg/L nitrate‐N, respectively. Greenlings (6.55 ± 1.83 g) were exposed to 5 mg/L (control) and 157 mg/L for 4 weeks in a recirculating aquaculture system. After 4 weeks, length, weight, feed conversion ratio, and specific growth rate were significantly (p < 0.05) lower for nitrate‐exposed fish than for control fish. Elevated nitrate exposure was associated with decreased plasma hemoglobin concentration and red blood cell count. Our results demonstrate that nitrate poses a threat to greenlings and provide information that is useful for establishing water quality criteria for early life stages of this cultured fish. The sensitivity of greenlings to elevated NO3− should be evaluated at other life stages to determine how chronic exposure might impact survival, growth, health, reproductive success, and harvest quality.