Non-coding RNAs (ncRNAs) in plant: Master regulators for adapting to extreme temperature conditions

Jha, Uday Chand; Nayyar, Harsh; Roychowdhury, Rajib; Prasad, P.V. Vara; Parida, Swarup K.; Siddique, Kadambot H.M.

doi:10.1016/j.plaphy.2023.108164

Cited by 8 publications

(2 citation statements)

References 208 publications

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“…Several lncRNAs, such as COLDAIR [58], COLDWRAP [59], and COOLAIR [60], suppress the expression of FLC through chromatin modification [240]. Furthermore, lncRNAs SVALKA [56], cryptic antisense CBF1 (asCBF1), and CIR (CBF intergenic lncRNA) regulate freezing tolerance through transcription of the CBF1 gene [241]. The COLD INDUCED lncRNA1 (CIL) participates in low-temperature stress response by affecting the reactive oxygen pathway or osmotic adjustment substance [61], while the cis-acting NAT lncRNA_2962 activates transcription of cold-responsive MADS AFFECT-ING FLOWERING 4 [242].…”

Section: Heat and Cold Stressmentioning

confidence: 99%

The Emerging Role of Non-Coding RNAs (ncRNAs) in Plant Growth, Development, and Stress Response Signaling

Yadav,

Mathan,

Dubey

et al. 2024

ncRNA

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Plant species utilize a variety of regulatory mechanisms to ensure sustainable productivity. Within this intricate framework, numerous non-coding RNAs (ncRNAs) play a crucial regulatory role in plant biology, surpassing the essential functions of RNA molecules as messengers, ribosomal, and transfer RNAs. ncRNAs represent an emerging class of regulators, operating directly in the form of small interfering RNAs (siRNAs), microRNAs (miRNAs), long noncoding RNAs (lncRNAs), and circular RNAs (circRNAs). These ncRNAs exert control at various levels, including transcription, post-transcription, translation, and epigenetic. Furthermore, they interact with each other, contributing to a variety of biological processes and mechanisms associated with stress resilience. This review primarily concentrates on the recent advancements in plant ncRNAs, delineating their functions in growth and development across various organs such as root, leaf, seed/endosperm, and seed nutrient development. Additionally, this review broadens its scope by examining the role of ncRNAs in response to environmental stresses such as drought, salt, flood, heat, and cold in plants. This compilation offers updated information and insights to guide the characterization of the potential functions of ncRNAs in plant growth, development, and stress resilience in future research.

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Section: Heat and Cold Stressmentioning

confidence: 99%

The Emerging Role of Non-Coding RNAs (ncRNAs) in Plant Growth, Development, and Stress Response Signaling

Yadav,

Mathan,

Dubey

et al. 2024

ncRNA

View full text Add to dashboard Cite

show abstract

“…Noncoding RNAs (ncRNAs), which do not encode proteins and were originally considered to be “transcriptional noise,” account for most of the total RNA in cells ( Nojima and Proudfoot, 2022 ). With the development and application of transcriptomic technology, the importance of an increasing number of ncRNAs for genomic organization and function has been revealed ( Jha et al., 2023 ). In fact, ncRNAs have gradually become a major focus of life sciences research ( Waititu et al., 2022 ; Cui, 2023 ).…”

Section: Introductionmentioning

confidence: 99%

Update on functional analysis of long non-coding RNAs in common crops

Zhang,

Pi,

Wang

et al. 2024

Front. Plant Sci.

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With the rapid advances in next-generation sequencing technology, numerous non-protein-coding transcripts have been identified, including long noncoding RNAs (lncRNAs), which are functional RNAs comprising more than 200 nucleotides. Although lncRNA-mediated regulatory processes have been extensively investigated in animals, there has been considerably less research on plant lncRNAs. Nevertheless, multiple studies on major crops showed lncRNAs are involved in crucial processes, including growth and development, reproduction, and stress responses. This review summarizes the progress in the research on lncRNA roles in several major crops, presents key strategies for exploring lncRNAs in crops, and discusses current challenges and future prospects. The insights provided in this review will enhance our comprehension of lncRNA functions in crops, with potential implications for improving crop genetics and breeding.

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Interaction Between ncRNAs and Their Response Network in Plants Under Multi-stress Environment

Saeed,

Shah,

Hussain

et al. 2024

ncRNAs: Mediated Regulation

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Non-coding RNAs (ncRNAs) in plant: Master regulators for adapting to extreme temperature conditions

Cited by 8 publications

References 208 publications

The Emerging Role of Non-Coding RNAs (ncRNAs) in Plant Growth, Development, and Stress Response Signaling

The Emerging Role of Non-Coding RNAs (ncRNAs) in Plant Growth, Development, and Stress Response Signaling

Update on functional analysis of long non-coding RNAs in common crops

Interaction Between ncRNAs and Their Response Network in Plants Under Multi-stress Environment

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