Secondary doping has a long history of use in conductivity enhancement in poly (3,4-ethylenedioxythiophene) : poly(styrene sulfonate) (PEDOT : PSS). However, very little research has addressed its detrimental effect on application performance of PEDOT : PSS in organic solar cells. Herein, it was shown that the uneven drying of secondary dopant-water mixture results in a nonuniform/continuous film structure, causing severe damage to the device efficiencies (dropping about 8 and 23 % for poly [(2,6-(4,8-bis(5-(2-ethylhexyl) and poly[(2,6-(4,8-bis(5-(2) cells, respectively) and thermal stabilities. Moreover, a simple yet robust dialysis treatment was proposed to solve the issue of noncontinuity and retain the secondary doping's advantages of quinoid structure simultaneously, thus demonstrating a significant enhancement in device performance. This study will be of great importance to the future exploration of the next generation of post-treatment strategy.