Aminoacyl-tRNA synthetases (ARS) are modular enzymes that aminoacylate transfer RNAs (tRNA) for their use by the ribosome during protein synthesis. ARS are essential and universal components of the genetic code that were almost completely established before the appearance of the last common ancestor of all living species. This long evolutionary history explains the growing number of functions being discovered for ARS, and for ARS homologues, beyond their canonical role in gene translation. Here we present a previously uncharacterized paralogue of seryl-tRNA synthetase named SLIMP (seryltRNA synthetase-like insect mitochondrial protein). SLIMP is the result of a duplication of a mitochondrial seryl-tRNA synthetase (SRS) gene that took place in early metazoans and was fixed in Insecta. Here we show that SLIMP is localized in the mitochondria, where it carries out an essential function that is unrelated to the aminoacylation of tRNA. The knockdown of SLIMP by RNA interference (RNAi) causes a decrease in respiration capacity and an increase in mitochondrial mass in the form of aberrant mitochondria.
Aminoacyl-tRNA synthetases (ARS)2 are an ancient family of enzymes with an essential role in protein synthesis. ARS catalyze the aminoacylation of transfer RNAs (tRNA) through a twostep catalytic reaction that first activates an amino acid with ATP to form an aminoacyl-adenylate and, second, to transfer the amino acid to the tRNA through the formation of an ester bond with the 3Ј-terminal ribose of the nucleic acid (1).Numerous gene duplication events have generated a broad group of proteins generally referred to as ARS-like proteins. The majority of ARS-like proteins are molecules homologous with specific domains of ARS that may or may not carry out functions related to the aminoacylation of tRNA. In addition to ARS-like proteins, ARS domains may, by themselves, carry out additional biological functions after being excised from their original structure. In other cases, proteins that are structurally associated to ARS may also dissociate from these interactions to carry out a number of signaling functions (2).The evolutionary analysis of ARS-like domains reveals that they have continued to emerge throughout evolution as the consequence of gene duplications, genomic reorganization, or lateral gene transfer events. The capacity of ARS genes to incorporate new functionalities through their structural reorganization is remarkable. This is probably due to the fact that the interaction with tRNA has driven ARS toward highly modular organizations that, secondarily, generate protein domains that are stable by themselves and can evolve to incorporate new cellular functions.Seryl-tRNA synthetases (SRS) are the enzymes responsible for the serylation of tRNA Ser . SRS are dimeric enzymes that belong to the subclass IIa of ARS, together with alanyl-, prolyl-, threonyl-, glycyl-, and histidyl-tRNA synthetases. The structure of the SRS monomer comprises an active site domain and an N-terminal domain that generally folds into a long coi...