Fractional calculus has been opening new doors in terms of better modeling and control of several phenomena and processes. Biomedical engineering has seen a lot of combined attention from clinicians, control engineers and researchers in their attempt to offer individualized treatment. A large number of medical procedures require anesthesia, which in turn requires a closely monitored and controlled level of hypnosis, analgesia and neuromuscular blockade, as well maintenance of hemodynamic variables in a safe range. Computer-controlled anesthesia has been given a tremendous amount of attention lately. Hemodynamic stabilization via computer-based control is also a hot topic. However, very few studies on automatic control of combined anesthesia–hemodynamic systems exist despite the fact that hemodynamics is strongly influenced by hypnotic drugs, while the depth of hypnosis is affected by drugs used in hemodynamic control. The very first multivariable fractional-order controller is developed in this paper for the combined anesthesia–hemodynamic system. Simulation studies on 24 patients show the effectiveness of the proposed approach.