“…RNase H cleavage is the dominant mechanism of antisense oligonucleotide (ASO) therapies, in which a DNA or modified DNA oligonucleotide is delivered that represses translation of a target mRNA through sequence-specific hybridization and subsequent RNase H cleavage and inactivation201 . Previous data from our lab had demonstrated that hydrodynamic dosing of a DNA oligo(T) hybridized to the mRNA poly(A) tail gave equivalent level of expression as dosing mRNA with no poly(A) tail86 , indicating that RNase H was active in vivo after hydrodynamic dosing, in this case to cleave off the poly(A) tail.To prove that RNase H was able to cleave off the tail extensions, SphI (+239) RNA and LU (+5,000) RNA were hybridized with the DNA oligo and incubated with E.coli RNase H. This resulted in distinct bands indicative of RNase H-specific cleavage(Figure 3-7B). The LU (+5,000) mRNA likely had multiple annealing and cleavage points.…”