Notes for genera: Ascomycota

Wijayawardene, Nalin N.; Hyde, Kevin D.; Rajeshkumar, Kunhiraman C.; Hawksworth, David L.; Madrid, Hugo; Kirk, Paul M.; Braun, Uwe; Singh, Rajshree V.; Crous, Pedro W.; Kukwa, Martin; Lücking, Robert; Kurtzman, Cletus P.; Yurkov, Andrey; Haelewaters, Danny; Aptroot, André; Lumbsch, H. Thorsten; Timdal, Einar; Ertz, Damien; Etayo, Javier; Phillips, Alan J. L.; Groenewald, Johannes Z.; Papizadeh, Moslem; Selbmann, Laura; Dayarathne, Monika C.; Weerakoon, Gothamie; Jones, E. B. Gareth; Suetrong, Satinee; Tian, Qing; Castañeda-Ruíz, Rafael F.; Bahkali, Ali H.; Pang, Ka−Lai; Tanaka, Kazuaki; Dai, Dong; Sakayaroj, Jariya; Hujslová, Martina; Lombard, L.; Shenoy, Belle Damodara; Suija, Ave; Maharachchikumbura, Sajeewa S. N.; Thambugala, Kasun M.; Wanasinghe, Dhanushka N.; Sharma, Bharati; Gaikwad, Subhash; Pandit, Gargee S.; Zucconi, Laura; Onofri, Silvano; Egidi, Eleonora; Raja, Huzefa A.; Kodsueb, Rampai; Cáceres, Marcela E. S.; Pérez‐Ortega, Sergio; Fiuza, Patrícia Oliveira; Monteiro, Josiane Santana; Vasilyeva, Larissa N.; Shivas, R. G.; Prieto, María; Wedin, Mats; Olariaga, Ibai; Lateef, Adebola Azeez; Agrawal, Yamini; Fazeli, Seyed Abolhassan Shahzadeh; Amoozegar, Mohammad Ali; Zhao, Guo Zhu; Pfliegler, Walter P.; Sharma, Gunjan; Oset, Magdalena; Abdel-Wahab, Mohamed A.; Takamatsu, Susumu; Bensch, Konstanze; Silva, Nimali I. de; Kesel, André De; Karunarathna, Anuruddha; Boonmee, Saranyaphat; Pfister, Donald H.; Lu, Yong‐Zhong; Luo, Zong-Long; Boonyuen, Nattawut; Daranagama, Dinushani A.; Senanayake, Indunil C.; Jayasiri, Subashini C.; Samarakoon, Milan C.; Zeng, Xiang‐Yu; Doilom, Mingkwan; Quijada, Luis; Rampadarath, Sillma; Abarca, Gabriela Heredia; Dissanayake, Asha J.; Jayawardana, Ruvishika S.; Perera, Rekhani H.; Tang, Li Zhou; Phukhamsakda, Chayanard; Hernández-Restrepo, Margarita; Ma, Xiaoya; Tibpromma, Saowaluck; Gusmão, Luís Fernando Pascholati; Weerahewa, Darshani; Karunarathna, Samantha C.

doi:10.1007/s13225-017-0386-0

Cited by 239 publications

(273 citation statements)

References 2,634 publications

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“…The checklist includes species names, family, life modes, disease name if any and locality. The current name is used according to Index Fungorum (2018) and Wijayawardene et al (2017) and the classification follows Wijayawardene et al (2018). Genera and species are listed in alphabetical order.…”

Section: Compiling the Checklistmentioning

confidence: 99%

Biodiversity of fungi on Vitis vinifera L. revealed by traditional and high-resolution culture-independent approaches

et al. 2018

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This study is unique as it compares traditional and high-resolution culture-independent approaches using the same set of samples to study the saprotrophic fungi on Vitis vinifera. We identified the saprotrophic communities of table grape (Red Globe) and wine grape (Carbanate Gernischet) in China using both traditional and culture-independent techniques. The traditional approach used direct observations based on morphology, single spore isolation and phylogenetic analysis yielding 45 taxa which 19 were commonly detected in both cultivars. The same set of samples were then used for Illumina sequencing which analyzed ITS1 sequence data and detected 226 fungal OTUs, of which 176 and 189 belong to the cultivars Carbanate Gernischet and Red Globe, respectively. There were 139 OTUs shared between the two V. vinifera cultivars and 37 and 50 OTUs were specific to Carbanate Gernischet and Red Globe cultivars respectively. In the Carbanate Gernischet cultivar, Ascomycota accounted for 77% of the OTUs and in Red Globe, almost all sequenced were Ascomycota. The fungal taxa overlap at the genus and species level between the traditional and culture-independent approach was relatively low. In the traditional approach we were able to identify the taxa to species level, while in the culture-independent method we were frequently able to identify the taxa to family or genus level. This is remarkable as we used the same set of samples collected in China for both approaches. We recommend the use of traditional techniques to accurately identify taxa. Culture-independent method can be used to get a better understanding about the organisms that are present in a host in its natural environment. We identified primary and secondary plant pathogens and endophytes in the saprotrophic fungal communities, which support previous observations, that dead plant material in grape vineyards can be the primary sources of disease. Finally, based on present and previous findings, we provide a worldwide checklist of 905 fungal taxa on Vitis species, which includes their mode of life and distribution.

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Section: Compiling the Checklistmentioning

confidence: 99%

Biodiversity of fungi on Vitis vinifera L. revealed by traditional and high-resolution culture-independent approaches

et al. 2018

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“…Remarks. The genus Cladosporium (Cladosporiaceae, Capnodiales) is a large genus of the Ascomycota (Wijayawardene et al 2017). The genus comprises species that are saprobes, endophytes and pathogens.…”

Section: Phyllosticta Capitalensis Henn Hedwigia 48: 13 (1908)mentioning

confidence: 99%

Identification of endophytic fungi from leaves of Pandanaceae based on their morphotypes and DNA sequence data from southern Thailand

Tibpromma¹,

Hyde²,

Bhat³

et al. 2018

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The authors established the taxonomic status of endophytic fungi associated with leaves of Pandanaceae collected from southern Thailand. Morphotypes were initially identified based on their characteristics in culture and species level identification was done based on both morphological characteristics and phylogenetic analyses of DNA sequence data. Twenty-two isolates from healthy leaves were categorised into eight morphotypes. Appropriate universal primers were used to amplify specific gene regions and phylogenetic analyses were performed to identify these endophytes and established relationships with extant fungi. The authors identified both ascomycete and basidiomycete species, including one new genus, seven new species and nine known species. Morphological descriptions, colour plates and phylogenies are given for each taxon. RESEARCH ARTICLESaowaluck Tibpromma et al. / MycoKeys 33: 25-67 (2018) 26

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“…Zhao were newly introduced to the genus (Prasher and Verma 2015, Tanaka et al 2015, Abdel-Aziz 2016, Boonmee et al 2016, da Silva et al 2016, Alves-Barbosa et al 2017, Zhang et al 2017) and nine species were re-assigned to Dictyocheirospora , Jalapriya and Vikalpa (Boonmee et al 2016). Wijayawardene et al (2017a) provided information on the availability of cultures and references to accessible sequence data.…”

Section: Introductionmentioning

confidence: 99%

New species in Dictyosporium, new combinations in Dictyocheirospora and an updated backbone tree for Dictyosporiaceae

Yang

Liu

Hyde

et al. 2018

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A survey of freshwater fungi on submerged wood in China and Thailand resulted in the collection of three species in Dictyocheirospora and four species in Dictyosporium including two new species in the latter genus. Morphological characters and phylogenetic analyses based on ITS, LSU and TEF1α sequence data support their placement in Dictyocheirospora and Dictyosporium (Dictyosporiaceae). An updated backbone tree is provided for the family Dictyosporiaceae. Descriptions and illustrations of the new taxa and re-collections are provided. Four new combinations are proposed for Dictyocheirospora.

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Notes for genera: Ascomycota

Cited by 239 publications

References 2,634 publications

Biodiversity of fungi on Vitis vinifera L. revealed by traditional and high-resolution culture-independent approaches

Biodiversity of fungi on Vitis vinifera L. revealed by traditional and high-resolution culture-independent approaches

Identification of endophytic fungi from leaves of Pandanaceae based on their morphotypes and DNA sequence data from southern Thailand

New species in Dictyosporium, new combinations in Dictyocheirospora and an updated backbone tree for Dictyosporiaceae

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