Notification of changes in taxonomic opinion previously published outside the IJSEM. List of changes in taxonomic opinion no. 35

Oren, Aharon

doi:10.1099/ijsem.0.005164

Cited by 4 publications

(4 citation statements)

References 19 publications

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“…The synonymy of P. psychrotolerans is also mentioned in the International Journal of Systematic and Evolutionary Microbiology list [33].…”

Section: Genome Featuresmentioning

confidence: 99%

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Pseudomonas benzopyrenica sp. nov., isolated from soil, exhibiting high-efficiency degradation of benzo(a)pyrene

Dong,

Rao,

et al. 2023

International Journal of Systematic and Evolutionary Microbiology

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A Gram-negative, yellow-pigmented, aerobic and rod-shaped bacterium, designated as strain BaP3T, was isolated from the soil. Strain BaP3T grew at 16–37℃ (optimum, 30 °C) and pH 6.0–8.0 (optimum, pH 7.0). Additionally, strain BaP3T could tolerate NaCl concentrations in the range 0–6 % (optimum, 1%). Moreover, strain BaP3T was motile by flagella. The phylogenetic analysis of 16S rRNA sequences showed that strain BaP3T belonged to the genus Pseudomonas , and the sequence was most closely related to Pseudomonas oryzihabitans CGMCC 1.3392T and Pseudomonas psychrotolerans DSM 15758T, with 99.66 % sequence similarity. Pseudomonas rhizoryzae RY24T was the next closely related species, exhibiting 99.38 % 16S rRNA gene sequence similarity. The DNA–DNA hybridization and average nucleotide identity values between strain BaP3T and its closely related types were below 50 and 92 %, respectively. Both results were below the cut-off for species distinction. The genomic DNA G+C content of strain BaP3T was 65.30 mol%. The predominant quinone in strain BaP3T was identified as ubiquinone Q-9. The major cellular fatty acids were summed feature 8 (C18 : 1 ω7c and/or C18 : 1 ω6c), summed feature 3 (C16 : 1 ω7c and/or C16 : 1 ω6c) and C16 : 0. These results indicated that strain BaP3T represents a novel species in the genus Pseudomonas . The type strain is BaP3T (CCTCC AB 2022379T=JCM 35914T), for which the name Pseudomonas benzopyrenica sp. nov. is proposed.

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“…The synonymy of P. psychrotolerans is also mentioned in the International Journal of Systematic and Evolutionary Microbiology list [33].…”

Section: Genome Featuresmentioning

confidence: 99%

“…Therefore, dDDH between the P. psychrotolerans and P. oryzihabitans type strains was not performed. The synonymy of P. psychrotolerans is also mentioned in the International Journal of Systematic and Evolutionary Microbiology list [33].…”

Section: Genome Featuresmentioning

confidence: 99%

Pseudomonas benzopyrenica sp. nov., isolated from soil, exhibiting high-efficiency degradation of benzo(a)pyrene

Dong,

Rao,

et al. 2023

International Journal of Systematic and Evolutionary Microbiology

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“…The genus Leeia , which is part of the family Leeiaceae in the order Neisseriales of class Betaproteobacteria [1–4], was first proposed in 2007 by Lim et al [5] with the description of the type species Leeia oryzae isolated from rice field soil in the Republic of Korea. The name Leeia aquatica has been proposed recently for an isolate cultured from surface freshwater from Chungju Lake, Republic of Korea [6].…”

Section: Introductionmentioning

confidence: 99%

Leeia speluncae sp. nov., isolated from Stegodon Sea Cave in Thailand

Charoenyingcharoen

Kim

Lee

et al. 2023

International Journal of Systematic and Evolutionary Microbiology

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A novel Gram-stain-negative, obligately aerobic, short rod-shaped and motile bacterium, designated strain BC00092T, was isolated from brackish ground water collected in Stegodon Sea Cave located at Satun UNESCO Global Geopark, Satun Province, Thailand. The phylogenetic analysis of BC00092T based on 16S rRNA gene sequences revealed that the strain represented a member of the genus Leeia and was closely related to Leeia oryzae DSM 17879T (96.68 %) and Leeia aquatica IMCC25680T (94.89 %). The average nucleotide identity and digital DNA–DNA hybridization values calculated from the whole-genome sequences between BC00092T and closely related type strains of species within the family Leeiaceae were lower than the species demarcation threshold values of 95 and 70 %, respectively. Moreover, five conserved signature indels of members of the family Leeiaceae were found in the protein sequences from the annotated assembled genome of BC00092T. According to the results of the polyphasic taxonomic study, strain BC00092T represents a novel species within the genus Leeia , for which the name Leeia speluncae sp. nov. is proposed. The type strain is BC00092T (TBRC 13508T = KCTC 92111T).

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“…Even the classification of this bacterium has been undergone to evaluation. Recent study suggested reclassifying of B. aryabhattai Shivaji et al as a later taxonomic synonym of Bacillus megaterium [25].…”

Section: Introductionmentioning

confidence: 99%

Bacillus aryabhattai SMNCH17-07 Strain: First Isolation and Characterization from Textile Waste Water with Evaluation of Its Decolorization Ability against Azo Dyes

Korcan¹,

Çitekci²,

Aydın³

et al. 2022

Tekstil Ve Konfeksiyon

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In this study, SA3 bacterial isolate, has been collected from textile wastewater area in industrial zone located in Usak province, Turkey. Phenotypic identification and phylogenetic determination on the basis of partial 16S rDNA sequence comparisons indicated that this strain is 100 % Bacillus aryabhattai SMNCH17-07. The decolorizing ability of this strain was evaluated against CI Acid Blue 193 CI 15707 and CI Acid Red 88 CI 15620 dyes. The results showed that absorbance rate of Acid Blue 193 by this isolate was (33, 17%) after 216 hours. While Absorbance rate of Acid Red 88 by this isolate was (62,68 %) after120 hours. According to FTIR spectrometer results of dyes adsorption it was found that bacterial retention sites were possibly aromatic and aliphatic (C = C, C = N, N = N) as well C-O groups. As the first report on the isolation of Bacillus aryabhattai SMNCH17-07 strain from textile wastewater with the evaluation of its ability to remove azo dyes, we suggest testing this bacterium as a low cost and ecofriendly bioremediator agent against further harmful dyes and pollutants ARTICLE HISTORY

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Notification of changes in taxonomic opinion previously published outside the IJSEM. List of changes in taxonomic opinion no. 35

Cited by 4 publications

References 19 publications

Pseudomonas benzopyrenica sp. nov., isolated from soil, exhibiting high-efficiency degradation of benzo(a)pyrene

Pseudomonas benzopyrenica sp. nov., isolated from soil, exhibiting high-efficiency degradation of benzo(a)pyrene

Leeia speluncae sp. nov., isolated from Stegodon Sea Cave in Thailand

Bacillus aryabhattai SMNCH17-07 Strain: First Isolation and Characterization from Textile Waste Water with Evaluation of Its Decolorization Ability against Azo Dyes

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