To find out potential GDNF family
receptor α1 (GFRα1)
agonists, small molecules were built up by molecular fragments according
to the structure-based drug design approach. Molecular docking was
used to identify their binding modes to the biological target GFRα1
in GDNF-binding pocket. Thereafter, commercially available compounds
based on the best predicted structures were searched from ZINC and
MolPort databases (similarity ≥ 80%). Five compounds from the
ZINC library were tested in phosphorylation and luciferase assays
to study their ability to activate GFRα1–RET. A bidental
compound with two carboxyl groups showed the highest activity in molecular
modeling and biological studies. However, the relative position of
these groups was important. The meta-substituted structure otherwise
identical to the most active compound 2-[4-(5-carboxy-1H-1,3-benzodiazol-2-yl)phenyl]-1H-1,3-benzodiazole-5-carboxylic
acid was inactive. A weaker activity was detected for a compound with
a single carboxyl group, that is, 4-(1,3-benzoxazol-2-yl)benzoic acid.
The substitution of the carboxyl group by the amino or acetamido group
also led to the loss of the activity.