Transgenic cotton expressing Cry51Aa2.834_16 Bt toxin (hereafter referred to as MON 88702) has the potential to be an important tool for pest management due to its unique activity against tobacco thrips, Frankliniella fusca. Unlike other Bt toxins targeting lepidopteran cotton pests, MON 88702 does not cause direct mortality but has an antixenotic effect that suppresses F. fusca oviposition. Previous work has shown neonicotinoid seed treated (NST) crops have similar behavioral effects on thrips. This study used non-choice and common garden experiments to examine how the presence of MON 88702 cotton and soybean (another F. fusca host) with and without NSTs might alter F. fusca infestation distributions. In a no-choice environment, significant larval establishment differences were observed, with untreated soybean plants becoming most heavily infested. In choice experiments, plants expressing MON 88702 or were neonicotinoid treated had significantly lower larval establishment. Larval density decreased as dispersal distance increased, suggesting reproductive decisions were negatively related to distance from the release point. Understanding how F. fusca responds to MON 88702 in an environment where adults can choose among multiple host plants will provide valuable context for projections regarding design of MON 88702 resistance refuges. Reduced larval establishment on NST cotton and soybean suggests that area-wide use of NSTs could reduce the number of susceptible F. fusca generated in unstructured crop refuges for MON 88702. These results also suggest that although the presence of NST MON 88702 could suppress reproduction and resistance selection, over time this benefit could erode resulting in increased larval establishment on NST cotton and soybean due to increased frequency of neonicotinoid resistant F. fusca populations.