2010
DOI: 10.1007/s11262-010-0506-3
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Novel parvovirus sublineage in the family of Parvoviridae

Abstract: Parvoviridae, which are classified into two subfamilies Parvovirinae and Densovirinae, can infect both vertebrate and insects and are related to a wide range of diseases in insects, animals, and humans. In this report, several new parvoviruses were identified in swine sera collected in southeastern China. The sequence analyses showed that the parvoviruses detected in southeastern China formed a distinct sublineage within the subfamily Parvovirinae. Based on these results, we propose a novel parvovirus sublinea… Show more

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Cited by 54 publications
(49 citation statements)
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“…Furthermore, other identified parvoviruses from swine, including the recently discovered PPV4 and Cnvirus, formed two distinct branches within other subfamilies of the Parvovirinae (Fig. 1b), consistent with previous studies (Cheung et al, 2010;Wang et al, 2010). Because the closest genetic relative of PBoV-like belonged to the genus Bocavirus, we identified it as a porcine bocavirus (PBoV) strain.…”
supporting
confidence: 88%
See 1 more Smart Citation
“…Furthermore, other identified parvoviruses from swine, including the recently discovered PPV4 and Cnvirus, formed two distinct branches within other subfamilies of the Parvovirinae (Fig. 1b), consistent with previous studies (Cheung et al, 2010;Wang et al, 2010). Because the closest genetic relative of PBoV-like belonged to the genus Bocavirus, we identified it as a porcine bocavirus (PBoV) strain.…”
supporting
confidence: 88%
“…A total of 29 nearly full-length genome sequences representing different parvovirus species of the subfamily Parvovirinae, including Parvovirus (HPV, MPV, LuIII, MVM, CPV, FPV and PPV1), Amdovirus (AMDV), Bocavirus (CnMV, BPV, HBoV1-4 and GBoV1), Erythrovirus (B19, SPV2, BPV3 and ChPV), Dependovirus (MDPV and GPV) and Hokovirus (PARV4, BHoV and PHoV) were used in this analysis. In addition, two novel porcine parvoviruses, PPV4 and Cnvirus (PPV-H1), recently discovered in piglets but not classified with any known parvovirus species of the subfamily Parvovirinae (Cheung et al, 2010;Wang et al, 2010), were also included. As shown in Fig.…”
mentioning
confidence: 99%
“…Contig SC5510 had an amino acid identity of 51% with VP1 of H-1 parvovirus, which belongs to the genus Parvovirus, and SC2718 had an amino acid identity of 67% with NS1 of human parvovirus B19, a member of the genus Erythrovirus. Contigs SC462 and SC2596 both had an amino acid identity of 51% to NS1 of parvovirus YX-2010/CHN, which was recently isolated in swine serum (44). Contig SC630 had 41% amino acid identity with VP1 of porcine bocavirus 2 pig/ZJD/China/2006, genus Bocavirus, which was recently identified from swine stool samples (9).…”
Section: Solexa Sequencing Readsmentioning
confidence: 99%
“…All samples were found to be negative for the pathogens mentioned above and a nonspecific etiologic agent associated with sow abortion was detected. To explore whether there were any unknown viruses present in the aborted pig fetuses, a SISPA experiment was conducted [21,22]. The sequencing reads were obtained and subjected to BLAST homology searching with sequences deposited in GenBank (BLASTx and tBLASTx programs; http://blast.ncbi.nlm.nih.gov.blast.…”
Section: Resultsmentioning
confidence: 99%
“…Two microliters of the ligation reaction were used to prime PCRs containing 50 pmol of Taq24 and 2.5 units of Taq polymerase (Promega Madison, Wisconsin, USA). Cycling conditions were as follows: 40 cycles, which consisting of 94°C for 1 min and 72°C for 3 min [21,22]. The Amplified PCR products were then analyzed by agarose gel electrophoresis.…”
Section: Sispamentioning
confidence: 99%