“…After energy minimization, the Chain A of falcipain 2 protein was defined as a receptor and the binding site sphere was selected based on the ligand binding location of E-64. A receptor grid was thereby generated around the binding cavity (active sites) of protein by specifying the key amino acid residues (Cys 42, Gly 83 and His 174) 1,7 . In DS, binding site sphere was set with a radius of 20 Å and x, y, z dimensions of -52.25, -4.46, -19.25, respectively.…”