The p38 mitogen-activated protein kinase (MAPK) is a key mediator of stress, extracellular-, growth factor-, and cytokine-induced signaling, and has been implicated in the development of cancer. Our previous work showed evidence for p38 MAPK activation in a subset of transformed follicular lymphomas (Elenitoba-Johnson et al. An important aim of functional genomic research is to globally identify and quantify specific proteomic and/or transcriptomic changes that are associated with physiologic or diseased states, thus enabling the elucidation of genes/proteins and signaling pathways that are associated with the phenotypic expression of a particular cellular state. The currently available microarray technologies permit the quantification of tens of thousands of gene transcripts and have been largely successful in demonstrating the global transcriptional changes accompanying the transition between cellular quiescence and activation, or during transition from normal to pathologic states (1-7). Proteomics, on the other hand, allows identification and quantification of up to a few thousand proteins, limited by the currently available technologies and the complex nature of the proteome especially in higher eukaryotes and mammalian cell systems. While the most widely used proteomics approach is the two-dimensional (2-D) 1 gel-based method followed by MS (8 -10), the recent development of multidimensional liquid chromatographic methods combined with MS/MS (LC-LC-MS/MS) has permitted sensitive detection of low-abundance proteins, membrane proteins and proteins with extreme pI (11-15). The ability to perform global quantitative proteomics has been significantly enhanced by the advent of the ICAT-based technology that is efficient in simplifying the proteome, and in combination with threedimensional 3-D LC-MS/MS permits detection and quantifiFrom the ‡Associated Regional and University Pathologists (ARUP)