Novel tRNA gene rearrangements in the mitochondrial genomes of praying mantises (Mantodea: Mantidae): Translocation, duplication and pseudogenization

Xu, Xiao-Dong; Guan, Jia-Yin; Zhang, Ziyi; Cao, Yang; Storey, Kenneth B.; Yu, Dan‐Na; Zhang, Jia-Yong

doi:10.1016/j.ijbiomac.2021.06.096

Cited by 17 publications

(51 citation statements)

References 63 publications

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“…Then, a tandem repeat of I *-Q-M *-NCR happened (Figure 1A). This rearrangement mechanism was similar to the description by Xu et al [6]. The possible explanation for T. milligratulata and Hu.…”

Section: Gene Rearrangements and Rearrangement Mechanismssupporting

confidence: 89%

“…Likewise, a 174 bp region between COX2 and trnK was discovered in Iridopteryginae JZ-2017 with high similarity to COX2, suggesting that it was COX2 [8]. Within Eremiaphiloidea, a similar rearrangement was also found in the Amelidae species (Yersinia mexicana), which was regarded as the result of parallel evolution because of the effect of the selection environment [6,82]. Thirdly, in the ND3-A-R-N-S-E-F-ND5 region, the arrangement A-R-A *-R was first found in Haaniidae.…”

Section: Gene Rearrangements and Rearrangement Mechanismsmentioning

confidence: 87%

“…These species are distributed worldwide, mainly in tropical and subtropical areas, and occupy diverse habitats ranging from tropical rainforests to arid deserts [ 2 , 3 ]. There have been numerous studies exploring the taxonomic status within Mantodea based on morphology or molecular data [ 4 , 5 , 6 , 7 , 8 , 9 , 10 , 11 , 12 , 13 , 14 , 15 , 16 , 17 , 18 , 19 ]. Existing research confirmed the monophyly of the order Mantodea and Mantodea clustered into Dictyoptera with Blattodea [ 4 , 17 , 20 ].…”

Section: Introductionmentioning

confidence: 99%

“…Gene rearrangements are a relatively common phenomenon in insects, but gene duplications are rare [ 26 ]. Gene duplications are mainly concentrated in Mantodea, Hymenoptera, and Hemiptera [ 6 , 8 , 30 , 39 , 40 , 41 ]. From previous research, particularly in connection with Mantodea, we hypothesized that mantises could be considered as promising candidates for investigating the origin and function of gene rearrangements and gene duplications in mitogenome of insects [ 6 , 8 , 11 , 30 , 39 ].…”

Section: Introductionmentioning

confidence: 99%

“…Gene duplications are mainly concentrated in Mantodea, Hymenoptera, and Hemiptera [ 6 , 8 , 30 , 39 , 40 , 41 ]. From previous research, particularly in connection with Mantodea, we hypothesized that mantises could be considered as promising candidates for investigating the origin and function of gene rearrangements and gene duplications in mitogenome of insects [ 6 , 8 , 11 , 30 , 39 ]. Three regions of particular interest were detected within the families Gonypetidae, Eremiaphilidae, Deroplatyidae, Hymenopodidae, Toxoderidae, Mantidae: CR- I - Q - M - ND2 , COX1 - K - D - ATP8, and ND3 - A - R - N - S - E - F - ND5 [ 6 , 8 , 11 , 30 , 39 ].…”

Section: Introductionmentioning

confidence: 99%

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Novel Mitochondrial Gene Rearrangement and Intergenic Regions Exist in the Mitochondrial Genomes from Four Newly Established Families of Praying Mantises (Insecta: Mantodea)

Lin

Cai

Zhao

et al. 2022

Insects

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Long non-coding regions (NCRs) and gene rearrangements are commonly seen in mitochondrial genomes of Mantodea and are primarily focused on three regions: CR-I-Q-M-ND2, COX2-K-D-ATP8, and ND3-A-R-N-S-E-F-ND5. In this study, eight complete and one nearly complete mitochondrial genomes of praying mantises were acquired for the purpose of discussing mitochondrial gene rearrangements and phylogenetic relationships within Mantodea, primarily in the newly established families Haaniidae and Gonypetidae. Except for Heterochaeta sp. JZ-2017, novel mitochondrial gene arrangements were detected in Cheddikulama straminea, Sinomiopteryx graham, Pseudovates chlorophaea, Spilomantis occipitalis. Of note is the fact that one type of novel arrangement was detected for the first time in the Cyt b-S2-ND1 region. This could be reliably explained by the tandem replication-random loss (TDRL) model. The long NCR between trnT and trnP was generally found in Iridopteryginae and was similar to the ND4L or ND6 gene. Combined with gene rearrangements and intergenic regions, the monophyly of Haaniidae was supported, whereas the paraphyly of Gonypetidae was recovered. Furthermore, several synapomorphies unique to some clades were detected that conserved block sequences between trnI and trnQ and gaps between trnT and trnP in Toxoderidae and Iridopteryginae, respectively.

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Section: Gene Rearrangements and Rearrangement Mechanismssupporting

confidence: 89%

Section: Gene Rearrangements and Rearrangement Mechanismsmentioning

confidence: 87%

Section: Introductionmentioning

confidence: 99%

Section: Introductionmentioning

confidence: 99%

Section: Introductionmentioning

confidence: 99%

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Novel Mitochondrial Gene Rearrangement and Intergenic Regions Exist in the Mitochondrial Genomes from Four Newly Established Families of Praying Mantises (Insecta: Mantodea)

Lin

Cai

Zhao

et al. 2022

Insects

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Mitochondrial genomes of 10 Mantidae species and their phylogenetic implications

Wang

Huang

et al. 2022

Arch Insect Biochem Physiol

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This article aims to present a phylogenetic evaluation of Mantidae based on a mitochondrial genome (mitogenome) data set. The mitogenome of 10 Mantidae species were sequenced using next-generation sequencing. The length of nine the complete mitogenomes ranged from 15,371 bp in Tenodera aridifolia to 16,063 bp in Hierodula longa. Mantidae mitogenomes have 37 genes and control region with two exceptions: five trnR copies in Statilia maculata, and H. zhangi was incomplete missing trnI, trnQ, trnM and a portion of the control region. There was a large noncoding region (LNC) between trnM and nad2 in H. chinensis, H. longa, H. maculata and Titanodula sp. Most of proteincoding genes (PCGs) used the typical start ATN codon and TAA/TAG stop codons. All tRNAs fold into the typical clover-leaf secondary structure except trnS1 which lacks a dihydrouracil (DHU) arm. Nucleotide diversity and Ka/Ks analysis of 13 PCGs showed that atp8 had the highest variability and fastest evolutionary rate. Phylogenetic relationships among 42 Mantidae species were reconstructed using the 13 PCGs and two rRNA genes using Bayesian Inference (BI) and Maximum Likelihood (ML) methods. Of the seven mantid subfamilies included in this analysis, only four had multiple exemplars, and of those only Mantinae and Vatinae formed monophyletic groups in BI and ML trees. Consistent with previous studies, the monophyly of the Hierudulinae and Tenoderinae were not been

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Multilocus phylogenetics of Palearctic Amelini shed light on the long-standing taxonomic puzzle of the dwarf-mantises Ameles, Pseudoyersinia, and Apteromantis

Luchetti,

Castellucci,

Corneti

et al. 2024

Org Divers Evol

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Novel tRNA gene rearrangements in the mitochondrial genomes of praying mantises (Mantodea: Mantidae): Translocation, duplication and pseudogenization

Cited by 17 publications

References 63 publications

Novel Mitochondrial Gene Rearrangement and Intergenic Regions Exist in the Mitochondrial Genomes from Four Newly Established Families of Praying Mantises (Insecta: Mantodea)

Novel Mitochondrial Gene Rearrangement and Intergenic Regions Exist in the Mitochondrial Genomes from Four Newly Established Families of Praying Mantises (Insecta: Mantodea)

Mitochondrial genomes of 10 Mantidae species and their phylogenetic implications

Multilocus phylogenetics of Palearctic Amelini shed light on the long-standing taxonomic puzzle of the dwarf-mantises Ameles, Pseudoyersinia, and Apteromantis

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