We studied the influence of the superconducting state on the magnetic properties in a thick IrMn(100 nm)/NiFe(100 nm) bilayer deposited by magnetron sputtering onto an yttrium–barium–copper–oxide (YBCO) substrate that was previously synthesized by the acetate method. The results from magnetization experiments showed that the sign of the effective exchange fields switched from positive, in the as-prepared heterostructure, to negative values when the sample goes below the superconducting temperature of the YBCO substrate. We, thus, demonstrated that the YBCO substrate, in its superconducting state, strongly influences the magnetic anisotropy of the thick ferromagnetic NiFe layer due to the proximity effect that occurs at the YBCO–NiFe interface, where a non-collinear magnetic spin structure is formed during the in-field sample deposition.