The compositions of the major glycolipids (GL-1) of five strains of Thermus aquaticus, the type strain of T. filiformis, T. oshimai SPS-11, and Thermus sp. strain CG-2 were examined by gas chromatography, gas chromatography-mass spectroscopy, fast atom bombardment-mass spectroscopy, and chemical methods. The results showed that, with the exception of T. aquaticus 15004, the organisms each have a major glycolipid whose structure was established as diglycosyl-(N-acyl)glycosaminyl-glycosyl diacylglycerol. Glucosamine was present in GL-1 of T. oshimai SPS-11 and Thermus sp. strain CG-2, while galactosamine was present in the GL-1 of T. aquaticus and T. filiformis. The novel major glycolipid of T. aquaticus 15004 was identified as galactofuranosyl-(N-acetyl)galactosaminyl-(N-acyl)galactosaminyl-glucosyl diacylglycerol. The hydroxy fatty acids found in the T. aquaticus strains and in the type strain of T. filiformis were exclusively amide linked to the galactosamine of the major glycolipid. Ester-linked hydroxy fatty acids were not detected in the diacylglycerol moiety of GL-1 of these organisms. Hydroxy fatty acids were detected neither in the major glycolipid of T. oshimai SPS-11 and Thermus sp. strain CG-2, in which glucosamine is present, nor in the major phospholipid of any of the strains examined.Strains of the thermophilic eubacterial genus Thermus, with an optimum growth temperature of about 70ЊC, including T. aquaticus, T. filiformis, T. thermophilus, T. scotoductus, T. oshimai, and other undescribed species of this genus, have polar lipids composed almost exclusively of a major phospholipid, designated PL-2, constituting between 77 and 93% of the polar lipid phosphorus, and a major glycolipid, designated GL-1, constituting between 70 and 96% of the polar lipid carbohydrate. A minor phospholipid (PL-1) and a minor glycolipid (GL-2) are also found in all strains examined (8,21,22,24).The major glycolipid of the Thermus spp. examined contains, depending on the strain, three glucose, two glucose and one galactose, or one glucose and two galactose residues and an N-acylated glucosamine or galactosamine (21,22,24). The major glycolipid from T. thermophilus HB-8 has been investigated in detail and contains a subterminal galactopyranose and a terminal galactofuranose. The innermost hexose bound to the diacylglycerol is glucose, and glucosamine is amide linked to iso-17:0 (21). The structure of this glycolipid was established as digalactosyl-(N-acyl)glucosaminyl-glucosyl diacylglycerol, and the GL-1 of the other strains examined is presumed to be similar.The fatty acids of Thermus spp. are predominantly iso-and anteisobranched, with low relative proportions of straightchain fatty acids (8,9,20). In the strains assigned to the species T. aquaticus, 3-hydroxy fatty acids, primarily isobranched, comprise 8 to 10% of the total cellular fatty acids. The type strain of T. filiformis contains 3-hydroxy anteisobranched fatty acids, but hydroxy fatty acids are absent in the other strains assigned to this species (9).To elucid...