Chemically exfoliated nanoscale few-layer thin LixCoO2 samples are studied as function of annealing at various temperatures, using transmission electron microscopy (TEM) and Electron Energy Loss Spectroscopies (EELS) in various energy ranges, probing the O-K and Co-L2,3 spectra as well as low energy interband transitions. These spectra are compared with first-principles density functional theory (DFT) calculations. A gradual disordering of the Li and Co cations in the lattice is observed starting from a slight distortion of the pure LiCoO2 R 3m to C2/m due to the lower Li content, followed by a P 2/m phase forming at ∼200 • C indicative of Li-vacancy ordering, formation of a spinel type F d 3m phase around 250 • C and ultimately a rocksalt type F m 3m phase above 350 • C. This disordering leads to a lowering of the band gap as established by low energy EELS. The Co-L2,3 spectra indicate a change of average Co-valence from an initial value of about 3.5 consistent with Li-deficiency related Co 4+ , down to 2.8 and 2.4 in the F d 3m and F m 3m, indicative of the increasing presence of Co 2+ in the higher temperature phases. The O-K spectra of the rocksalt phase are only reproduced by a calculation for pure CoO and not for a model with random distribution of Li and Co. This indicates that there may be a loss of Li from the rocksalt regions of the sample at these higher temperatures. The conductivity measurements indicate a gradual drop in conductivity above 200 • C. This loss in conductivity is clearly related to the more Li-Co interdiffused phases, in which a low-spin electronic structure is no longer valid and stronger correlation effects are expected. Calculations for these phases are based on DFT+U with Hubbard-U terms with a random distribution of magnetic moment orientations, which lead to a gap even in the paramagnetic phase of CoO.