The İstanbul-Zonguldak Tectonic Unit (NW Turkey) is the unmetamorphosed continental fragment of Far East Avalonia. It contains sedimentary rocks, ranging in age from Upper Ediacaran to Carboniferous, consisting of the İstanbul and Zonguldak Terranes. It is characterized by a sequence with stratigraphic gaps in two different times, including the Ediacaran–Cambrian and Silurian–Devonian transition. On the other hand, unconformity planes are observed in the Silurian-Devonian transition in the Zonguldak Terrane, while defining as a conformable transition in the İstanbul Terrane in spite of lacking strata of the Silurian-Devonian transition. Here, I present analytical data of gabbro apophyses and dykes in the İstanbul Terrane. They have porphyritic and ophitic textures. U-Pb dating on igneous zircons from gabbro apophyses yields Early Silurian of ca. 434.2 ± 1.1 Ma (2σ) and its Pb-loss ages define the Early Devonian of ca. 415.5 ± 2.1 Ma (2σ), ranging in age from 420 to 410 Ma. Geochemically, gabbro apophyses and dykes show alkaline character, and include with-in plate components; however, they are magmatic products of a syncollisional setting. Overall, I suggest that Early Silurian gabbro intrusions intruded into the İstanbul Terrane during the last phase of soft-docking event, formed at 443-425 Ma between Far East Avalonia and Baltica. Additionally, Early Devonian Pb-loss ages of gabbro intrusive rocks in the İstanbul Terrane correspond to unconformity planes in the Zonguldak Terrane, thus indicating the deformational effect of the Caledonian orogeny in the İstanbul Terrane. All in all, these data display that the absence of sedimentary rocks in the Silurian-Devonian transition in the İstanbul Terrane relates to the existence of a stratigraphic gap during this time.