The Blonder-Tinkham-Klapwijk model of the Point-Contact Andreev Reflection spectroscopy does not provide an adequate description of experiment in the presence of magnetic field. We demonstrate this using a junction between a niobium tip and a copper film. We modify the theory to explicitly take into account the contribution to conductance that stems from the normal vortex cores in the superconductor. These results have important implications for interpretation of transport spin polarisation measurements using PCAR technique. We demonstrate that stray magnetic fields can be responsible for the experimentally observed dependence of the spin polarisation on the strength of the interface barrier, and potential misassignment of the inferred spin polarisation.PACS Numbers: 74.45.+c; 75.50.Cc; The recent theoretical [1][2][3] and experimental [4][5][6][7][8][9][10][11][12][13][14][15][16][17][18] development of point-contact Andreev reflection (PCAR) spectroscopy is driven by the interest to find materials with high degree of spin polarization P. Such materials can be used for integration in spinbased microelectronics [19][20][21]. The technique may be used to determine the spatial variation of spinpolarised current in semiconductors [22,23]. Importantly, the technique uses a superconducting (SC) tip as a probe and either an externally applied magnetic field or the stray field from the sample may affect the behaviour of the tip. Earlier experimental works [24][25][26][27][28] on PCAR reported the enhancement of spectral broadening [29] with magnetic field, although without a consistent explanation of the mechanism. The influence of the magnetic field on the tip has not been addressed at all in the context of the spin polarisation measurements previously, despite the significant number of experimental studies on point-contact with ferromagnetic materials [4][5][6][7][8][9][10][11][12][13][14][15][16] and magnetic semiconductors [17,18].Here we present the analysis of the behaviour of niobium tips in contact with an epitaxial copper film, in presence of an external magnetic field H, applied parallel or perpendicular to the tip. To describe the field dependence of PCAR spectra, we introduce an extension to the Blonder-Tinkham-Klapwijk (BTK) model [24] that takes into account the effect of normal vortex cores in the SC tip explicitly. We show that the effect of vortices has profound implications for the analysis of spin polarisation in ferromagnetic samples.Point contacts were created by driving a mechanically sharpened Nb tip (made of a 0.25mm-diameter, 99.9% pure Nb wire), into the surface of a 60-nm thick, (100)-oriented copper film. The conductance vs voltage ( ) (V G ) dependences were recorded using a standard lock-in technique, at T = 4.2K.Point-contact spectra with the field applied parallel or perpendicular to the tip (Fig. 1), show gradual suppression of the spectral features with increasing magnetic field. All spectra are normalized by the background conductance taken at approximately 20mV, where the conductance...