The
glycocalyx, a thick layer of carbohydrates, surrounds the cell
wall of most bacterial and parasitic pathogens. Recognition of these
unique glycans by the human immune system results in destruction of
the invaders. To elicit a protective immune response, polysaccharides
either isolated from the bacterial cell surface or conjugated with
a carrier protein, for T-cell help, are administered. Conjugate vaccines
based on isolated carbohydrates currently protect millions of people
against
Streptococcus pneumoniae
,
Haemophilus
influenzae
type b, and
Neisseria meningitides
infections. Active pharmaceutical ingredients (APIs) are increasingly
discovered by medicinal chemistry and synthetic in origin, rather
than isolated from natural sources. Converting vaccines from biologicals
to pharmaceuticals requires a fundamental understanding of how the
human immune system recognizes carbohydrates and could now be realized.
To illustrate the chemistry-based approach to vaccine discovery, I
summarize efforts focusing on synthetic glycan-based medicinal chemistry
to understand the mammalian antiglycan immune response and define
glycan epitopes for novel synthetic glycoconjugate vaccines against
Streptococcus pneumoniae
,
Clostridium difficile
,
Klebsiella pneumoniae
, and other bacteria. The
chemical tools described here help us gain fundamental insights into
how the human system recognizes carbohydrates and drive the discovery
of carbohydrate vaccines.