Reproductive mode,i.e.,the proportion of individuals in populations produced by clonality, selfing and outcrossing in populations, determines how hereditary material is transmitted through generations. It shapes genetic diversity and its structure over time and space.Ludwigia grandiflorasubsp.hexapetala(Lgh) is a partially clonal, polyploid, hermaphroditic, and heteromorphic plant that recently colonized multiple countries worldwide. In western Europe, individuals in this species are either self-incompatible caused by a late-acting self-incompatibility (LSI) system developing long-styled flowers, or self-compatible (SC) developing short-styled flowers. We do not yet know if the LSI system is effective in driving genetic diversity within populations, as previously showed for gametophytic and sporophytic SI systems. In addition, determining the reproductive mode of newly establishedLghpopulations in Europe will contribute to understanding their ecological and evolutionary roles at the margins of species distribution. However, we still lack of a full approach, including the essential step of unfolding population genetic indices to estimates rates of clonality, selfing and outcrossing in autopolyploids.In this study, we proposed such an approach to measure genetic diversity to assess reproductive modes on 53 LSI and SC populations newly colonizing France and northern Spain, by assessing SNPs on a distinct autotetraploid part of theLghgenome. SNPs are easily reproducible, adapted for intraspecific genetic studies and allow confident allele dosage to genotype autopolyploid individuals. In turn, such genotyping data made it possible to use recently developed methods for computing and interpreting genetic diversity to assess reproductive mode in each population.We found that populations reproduced mainly clonally but with a high diversity of genotypes along with rates of sexual events up to 40%. We also found evidence for local admixture between LSI and SC populations in a background of genetic structure between pairs of LSI and SC populations that was twice the level found among pairs of LSI populations or pairs of SC populations, arguing that SC and LSI populations may follow distinct expansion dynamics. These observations of sexual events in nearly all populations and of high diversity in clonal lineages imply to integrate their potential adaptation of populations to management plans. We also took advantage of the spatial segregation of LSI and SC populations invading France to characterize the population genetic consequences of an LSI system. LSI and SC populations showed similar rates of clonality but significantly different rates of selfing, as expected considering their breeding system, and despite the small rates of failure in the LSI system. Within the 53 studied populations, the 13 SC-only populations were distinguished by fewer effective alleles, lower observed heterozygosity, and higher inbreeding coefficients, linkage disequilibrium and estimates of selfing than found in LSI populations. These results suggested that genetic structural differences found between LSI and SC populations mainly came from the increased selfing rates in SC populations rather than due to the genome-wide consequences of outcrossing in LSI populations or due to different rates of clonality. The overall maintenance of higher genetic diversity, with the possibility of resorting to clonality, selfing and outcrossing, may explain why LSI populations seem to be more prevalent in all newly expanding populations worldwide.BeyondLgh, our methodological approach may inspire future studies to assess the reproductive mode of other autopolyploid eukaryote populations, and our results emphasize the necessity to consider the variations of reproductive modes when managing invasive plant species.