Abstract. It has been reported that the rs1862214 single nucleotide polymorphism (SNP) in the programmed cell death 5 gene (PDCD5) is associated with smoking-related lung cancer risk and prognosis in a European population with a history of smoking. The aim of this study was to investigate the status and impact of SNPs in the PDCD5 locus of a Japanese population. We developed an assay based on realtime PCR with melting curve analysis for determining the rs1862214 SNP, and examined this SNP in 165 lung cancer patients and 180 healthy volunteers. Of the 165 lung cancer patients (107 smokers), 25 (17), 72 (47) and 68 (43) had the CC, CG and GG genotypes of rs1862214, respectively. Of the 180 volunteers (117 smokers), 31 (24), 81 (52) and 68 (41) had the CC, CG and GG genotypes of rs1862214, respectively. No significant difference in allelic distribution was found between Japanese patients and healthy controls, even among smokers. Based on the published data, the distribution of this SNP appears to be significantly different in Japanese and European populations. No significant difference in prognosis according to the SNP was observed, either in patients with a history of smoking or in the total number of patients. This too differs from the results from a European population. In conclusion, we developed a convenient real-time PCR-based assay for the genotyping of rs1862214 in the PDCD5 locus. The distribution of the rs1862214 SNP in our Japanese population differs from its distribution in a European population, and is not related to the risk of cancer or to poor prognosis in lung cancer. This suggests the presence of an ethnicity-related difference in the role of PDCD5 in the pathogenesis of lung cancer.
IntroductionLung cancer is the leading cause of cancer death in Japan and many other countries worldwide (1,2). Survival among patients with non-small cell lung cancer remains unsatisfactory because many locally advanced or metastatic cases are unresectable. Even patients with the early stages of the disease who undergo complete resections often experience recurrence, resulting in an unfavorable prognosis. In short, until now the effectiveness of therapeutic strategies has been limited.In addition to aiding in the development of therapeutic strategies, the prevention or early detection of cancer improves its rate of mortality. Several genetic polymorphisms are considered to be molecular markers that predict the risk, progression and prognosis of various cancers (3-7). Indeed, single nucleotide polymorphisms (SNPs) in several genes are reported to be associated with the risk of lung cancer (8-10), for example SNPs in the caspase-3 and vascular endothelial growth factor genes (11,12).Recently, Spinola et al reported that the rs1862214 SNP in the programmed cell death 5 gene (PDCD5) locus, which is known to be involved in apoptosis (13,14), was associated with lung cancer risk and prognosis in a European population with a history of smoking (15). They performed a case-control study using German and Italian lung cancer pa...