We investigated dibenzo [a,h]thianthrene molecules adsorbed on ultrathin layers of NaCl using a combined low-temperature scanning tunneling and atomic force microscope. Two stable configurations exist corresponding to different isomers of free nonplanar molecules. By means of excitations from inelastic electron tunneling we can switch between both configurations. Atomic force microscopy with submolecular resolution allows unambiguous determination of the molecular geometry, and the pathway of the interconversion of the isomers. Our investigations also shed new light on contrast mechanisms in scanning tunneling microscopy. DOI: 10.1103/PhysRevLett.108.086101 PACS numbers: 68.43.Fg, 68.37.Ef, 68.37.Ps, 82.37.Gk Recently, the chemical structure of a pentacene molecule has been visualized by means of noncontact atomic force microscopy (AFM) [1]. Shortly after, this method assisted in identifying the structure of an organic molecule [2]. In conjunction with the capability of scanning tunneling microscopy (STM) to perform orbital imaging on ultrathin insulating films [3], it is possible to gain independent and complementary information of the molecular as well as of the adsorption geometry, but also of the electronic structure of individual molecules.Unambiguous identification of configurational changes of adsorbed molecules is a challenging task by means of STM alone [4], probing the local density of states rather than geometry. Usually, additional techniques such as nearedge x-ray adsorption fine structure measurements have to be employed [5,6].In this Letter, we present combined STM and AFM experiments of dibenzo[a,h]thianthrene (DBTH) molecules adsorbed on ultrathin layers of sodium chloride. We demonstrate controlled switching between two different molecular configurations by means of inelastic excitations. AFM images with submolecular resolution directly reveal the configurational changes. Stereochemistry could be utilized to determine their interconversion pathway in detail.All AFM measurements were carried out in a homebuilt combined STM and AFM operating in an ultrahigh vacuum (p < 10 À10 mbar) at T ¼ 5 K. The AFM, based on the qPlus tuning fork design (spring constant k 0 % 1:8 Â 10 3 N m À1 , resonance frequency f 0 ¼ 26 057 Hz, quality factor Q % 10 4 ) [7], was operated in the frequency modulation mode [8]. Sub-Å ngstrom oscillation amplitudes have been used to maximize the lateral resolution [9]. Some of the STM measurements ( Figs. 1 and 2) were performed in a similar modified commercial STM from SPS-CreaTec. The bias voltage V was applied to the sample.Sodium chloride was evaporated onto clean Cu(111) single crystals at sample temperatures of about 280 K [10]. All experiments were carried out on a double layer, and we denote this substrate system as NaClð2MLÞ= Cuð111Þ. The DBTH molecules were synthesized as described previously [11].Low coverages of CO (for tip functionalization) and DBTH molecules were adsorbed at sample temperatures below 10 K. Following a recently developed technique, the tip ha...