The outbreak of Sargassum horneri in a large area in China has not only posed a serious threat to the ecological environment and human life in the coastal waters, but also hindered the development of waterway transportation and the local economy. Therefore, we isolated polysaccharides from S. horneri, named SHP, and evaluated the antioxidant activity of SHP in vitro and in vivo by exploring the effect of SHP on H2O2-induced African green monkey kidney cell (Vero cell) and zebrafish. The results showed that SHP could scavenge DPPH radicals, hydroxyl radicals (·OH), superoxide anion radicals (O_2), and total antioxidant capacity (T-AOC), which respectively were 68%, 65.48 U mL− 1, 84.86 U mL− 1 and 33.55; In addition, SHP can increase SOD, CAT and GSH-PX activities in zebrafish; It also effectively inhibits MDA and ROS levels in Vero cells and zebrafish to weaken oxidative damage caused by H2O2, to realize the protective effect of SHP on Vero cells and zebrafish. In conclusion, SHP has the potential as a natural antioxidant. SHP can be considered for use as a natural antioxidant in the biomedical, cosmetic, and food industries, thus alleviating environmental stress caused by S. horneri, and realizing resource utilization.