Background: Aedes albopictus and Aedes aegypti are mosquitoes commonly adapted to tropical and subtropical regions. These vectors can transmit different types of arboviruses causing a serious concern to public health. New alternatives for the vector/arboviruses control are emerging, and in this sense the protozoan Ascogregarina taiwanensis may present potential as a biological control agent against these mosquitoes. Methods: To evaluate the effects of protozoan A. taiwanensis, mosquitoes were parasitized with a solution containing oocysts and evaluated to lifetime, fertility, fecundity for Ae. albopictus and for Ae. aegypti interaction with Azadirachta indica and Temephos. Results: In this work it was possible to observe the protozoan morphology in mosquitoes Ae. albopictus, as well its negative influence on mortality, 73% and non-parasitized was 44%. The number of eggs oviposited by parasitized females of Ae. albopictus was lower (3,490) than for the non-parasitized females (5,586). In addition, the hatchability and/or viability of these eggs were also lower for the parasitized females (63%) than the non-parasitized ones (74%). For Ae. aegypti mosquitoes, a synergism between the use of A. taiwanensis associated with a chemical insecticide and a botanical insecticide was observed. The results demonstrate that when Ae. aegypti larvae was parasitized by A. taiwanensis and exposed to the oil of Az. indica or to the organophosphate Temephos present a greater mortality. Conclusion: It was notable that A. taiwanensis can be a potential for biological control and adjuvant of insecticides. We also provide important information about the maintenance of A. taiwanensis in laboratory.