Pathogen profile of Baiyangdian Lake sediments using metagenomic analysis and their correlation with environmental factors

Xiao, Rong; Hu, Yanping; Wang, Yaping; Li, Junming; Guo, Congling; Bai, Junhong; Zhang, Ling; Zhang, Kegang; Jorquera, Milko A.; Acuña, Jacquelinne J.; Pan, Wenbin

doi:10.1016/j.scitotenv.2023.169628

Science of The Total Environment

2024

DOI: 10.1016/j.scitotenv.2023.169628

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Pathogen profile of Baiyangdian Lake sediments using metagenomic analysis and their correlation with environmental factors

Rong Xiao,

Yanping Hu,

Yaping Wang

et al.

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2024

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Cited by 4 publications

References 53 publications

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Accumulation and ecological risk assessment of diazinon in surface sediments of Baiyangdian lake and its potential impact on probiotics and pathogens

Wang,

Xiao,

et al. 2024

Environmental Pollution

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Accumulation and ecological risk assessment of diazinon in surface sediments of Baiyangdian lake and its potential impact on probiotics and pathogens

Wang,

Xiao,

et al. 2024

Environmental Pollution

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Distribution of organophosphorus pesticides and its potential connection with probiotics in sediments of a shallow freshwater lake

Hu,

Xiao,

Wang

et al. 2024

Journal of Contaminant Hydrology

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High-throughput profiling of antibiotic resistance genes in the Yellow River of Henan Province, China

Zhang,

Yang,

Zhang

et al. 2024

Sci Rep

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Profiling antibiotic resistance genes (ARGs) in the Yellow River of China’s Henan Province is essential for understanding the health risks of antibiotic resistance. The profiling of ARGs was investigated using high-throughput qPCR from water samples in seven representative regions of the Yellow River. The absolute and relative abundances of ARGs and moble genetic elements (MGEs) were higher in summer than in winter (ANOVA, p < 0.001). The diversity and abundance of ARGs were higher in the Yellow River samples from PY and KF than the other sites. Temperature ( r = 0.470 ~ 0.805, p < 0.05) and precipitation ( r = 0.492 ~ 0.815, p < 0.05) positively influenced the ARGs, while pH had a negative effect ( r = − 0.462 ~ − 0.849, p < 0.05). Network analysis indicated that the pathogenic bacteria Rahnella , Bacillus , and Shewanella were the possible hub hosts of ARGs, and tnpA1 was the potential MGE hub. These findings provide insights into the factors influencing ARG dynamics and the complex interaction among the MGEs, pathogenic bacteria and environmental parameters in enriching ARGs in the Yellow River of Henan Province.

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Pathogen profile of Baiyangdian Lake sediments using metagenomic analysis and their correlation with environmental factors

Cited by 4 publications

References 53 publications

Accumulation and ecological risk assessment of diazinon in surface sediments of Baiyangdian lake and its potential impact on probiotics and pathogens

Accumulation and ecological risk assessment of diazinon in surface sediments of Baiyangdian lake and its potential impact on probiotics and pathogens

Distribution of organophosphorus pesticides and its potential connection with probiotics in sediments of a shallow freshwater lake

High-throughput profiling of antibiotic resistance genes in the Yellow River of Henan Province, China

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