ObjectiveTo explore the relationships among anxiety, depression, and headache‐related disability in a pediatric clinic–based retrospective cross‐sectional study.BackgroundAnxiety and depression are commonly considered comorbidities of headache disorders and are frequently seen in children and adolescents. These conditions can contribute to disability and may have a cumulative impact. In this study, we tested whether self‐reported anxiety and/or depression in youth were associated with headache‐related disability.MethodsThis was a retrospective cross‐sectional study of children ages 6–17 years old who completed a headache intake questionnaire at the time of a new outpatient neurology visit. Those who reported on behavioral health symptoms, involvement of a behavioral health provider (i.e., yes/no), and the PedMIDAS (a validated metric of headache‐related disability) were included. The relationship between anxiety and/or depression and headache‐related disability was examined.ResultsOf the 12,660 questionnaires queried, 9118 met criteria for inclusion. Respondents were 64.0% female and had a median age of 13.5 years (interquartile range [IQR] 10.3, 15.7). Compared to patients without self‐reported anxiety/depression, patients with anxiety and depression reported higher headache‐related disability (M = 17.0, [IQR 6.0, 41.0]) even after accounting for covariates (estimated difference = 6.0, 95% confidence interval [CI: 4.4–7.5]). For participants with anxiety and/or depression, having a behavioral health provider was associated with greater headache‐related disability (estimated difference = 7.0; 95% CI 4.6–9.3).ConclusionsPatients with self‐reported anxiety and/or depression reported higher headache‐related disability. Having a behavioral health provider was associated with greater headache‐related disability, indicating the complexity and high level of need for this population. Further research is needed to understand the directionality of these results; however, patients with headache as well as depression and or anxiety are a vulnerable group who may benefit from an integrated care model.