Total rat liver poly(A)-containing polysomal mRNA was size-fractionated on polyacrylamide gels in 98 % formamide. Complementary DNA (cDNA) was prepared from the 8 -14-S mRNA fraction and separated into sequences representing abundant and non-abundant mRNAs. The cDNA complementary to the abundant small mRNA of the rat liver cell (approximately 20 species) was hybridized to nuclear RNA of different lengths to determine the size distribution of nuclear RNA molecules which contain these messenger sequences. It was found that :1. All abundant 8 -14 -S poly(A)-containing mRNAs have larger nuclear precursor molecules ; 20% of the different messenger sequences are found in nuclear RNA of several times their cytoplasmic length.2. 70 % of the mass of the examined nuclear messenger sequences is in RNA molecules of a size similar to their polysomal mRNA; 30% are in larger than 18-S RNA and 2% are between 37 S and 44 S.3 . The majority of small messenger-containing RNA molecules in the RNA prepared from isolated nuclei are of true nuclear origin, since their frequency distribution differs significantly from that of the polysomal 8 -14-S mRNA.To understand the regulation of gene expression in eucaryotic cells it is crucial to know more about nuclear processes involved in the biogenesis of mRNA. Several features of the synthesis and structure of hnRNA indicate its role in mRNA metabolism (for review see [l-51). Indirect evidence first led to the postulate that hnRNA contained precursor molecules to mRNA [6,7]. Hybridization-competition experiments later demonstrated base-sequence homology between polyribosomal mRNA and hnRNA from HeLa cells [8]. Furthermore, it was found that viral-specific RNAs in and polyoma-infected [lo] cells are transcribed as giant RNA molecules. However, owing to the enormous sequence complexity, the large size and the high turnover of hnRNA, a detailed describtion of the nuclear pathway of messenger sequences has not yet Abbreviations. Hepes. 4-(2-hydroxyethyl)-l-piperazineethanesulfonic acid; AMV, avian myeloblastosis virus; cDNA, DNA copy complementary to mRNA ; hnRNA, polydisperse high-molecularweight nuclear RNA; rot value, concentration of RNA (as mol phosphate/l) times time of hybridization (in s); rotllz value, rot value at which half the hybridizable cDNA is hybridized; vgt value, RNA derived from the amount of liver tissue (g), hybridized in IO-pI assay volume, times the hybridization time (h).Enzyme. S 1 nuclease, single-strand-specific endonuclease from Aspergillus oryzae (EC 3.1.4.21).been possible. The use of molecular hybridization with complementary DNA copies of specific mRNA molecules to identify messenger sequences in steadystate nuclear RNA has resulted in an increased amount of new information, but no general picture has emerged from these studies. For example, larger nuclear precursor RNA molecules for globin mRNA have been found, although with conflicting results as to their largest size [ l l -171. For the case of ovalbumin mRNA, no larger nuclear RNA containing the messenger se...