We recently completed construction of a small-animal PET systemthe MiniPET-3-that uses state-of-the-art silicon photomultiplier (SiPM) photosensors, making possible dual-modality imaging with MRI. In this article, we compare the MiniPET-3 with the MiniPET-2, a system with the same crystal geometry but conventional photomultiplier tubes (PMTs). Methods: The standard measurements proposed by the National Electrical Manufacturers Association NU 4 protocols were performed on both systems. These measurements included spatial resolution, system sensitivity, energy resolution, counting rate performance, scatter fraction, spillover ratio for air and water, recovery coefficient, and image uniformity. The energy windows were set to 350-650 keV on the MiniPET-2 and 360-662 keV on the MiniPET-3. Results: Spatial resolution was approximately 17% better on average for the MiniPET-3 than the MiniPET-2. The systems performed similarly in terms of peak absolute sensitivity (∼1.37%), spillover ratio for air (∼0.15), spillover ratio for water (∼0.25), and recovery coefficient (∼0.33, 0.59, 0.81, 0.89, and 0.94). Uniformity was 5.59% for the MiniPET-2 and 6.49% for the MiniPET-3. Minor differences were found in scatter fraction. With the ratlike phantom, the peak noise-equivalent counting rate was 14 kcps on the MiniPET-2 but 24 kcps on the MiniPET-3. However, with the mouselike phantom, these values were 55 and 91 kcps, respectively. The optimal coincidence time window was 6 ns for the MiniPET-2 and 8 ns for the MiniPET-3. Conclusion: Images obtained with the SiPM-based Mini-PET-3 small-animal PET system are similar in quality to those obtained with the conventional PMT-based MiniPET-2.Key Words: MiniPET; small-animal PET scanner; performance evaluation; instrumentation; molecular imaging J Nucl Med 2015; 56:1948 56: -1953 56: DOI: 10.2967 Ef forts to integrate PET and MRI have advanced significantly in recent years, fostered mainly by new photosensor technologies (1-4). Conventional photomultiplier tube (PMT) detectors benefit from high signal gain in the range of 10 5 -10 7 (5,6). Low noise and fast transit time (;100 ps) are also available today and have made PMTs the first candidate for applications involving time-of-flight PET technology. In addition, PMTs have lower noise than avalanche photodiode or silicon photomultiplier (SiPM) detectors (5). However, in strong magnetic fields PMTs cannot produce position maps that are acceptable for imaging purposes. In contrast, avalanche photodiodes can be used efficiently as a photosensor for PET when near strong magnets. Some successful approaches using avalanche photodiodes have already been introduced for combined PET/MRI applications (2,7,8). However, avalanche photodiodes have significantly higher rise times than PMTs (up to 2-3 ns) (5), preventing the timing resolution from being adequate for time-of-flight PET. The low gain (;10 2 ) is also a disadvantage of avalanche photodiodes (2,5).By coupling lutetium oxyorthosilicate crystals with new SiPM technology, a timing resolutio...