“…HMMs form a class of stochastic processes which have received a lot of attention in the last 25 years, with many interesting applications in hydrology, where they have been used mostly to analyse rainfall data (e.g., Zucchini & Guttorp, 1991;Samson, 1998;Hughes, Guttorp, & Charles, 1999;Bellone, Hughes, & Guttorp, 2000;Thyer & Kuczera, 2000;Betrò, Bodini, & Cossu, 2008;Ailliot, Thompson, & Thomson, 2009;Carey-Smith, Sansom, & Thomson, 2014;Heaps, Boys, & Farrow, 2015). Spezia, Futter, and Brewer (2010) was the first application of HMMs to water quality time series, and the methodology is extended here to a spatio-temporal framework.…”