The generation of surface variation among many divergent species of Mollicutes (mycoplasmas) occurs through stochastic expression patterns of diverse lipoprotein genes. The size and wide distribution of such variable gene sets in minimal (ϳ0.6-to 1.4-Mb) mycoplasmal genomes suggest their key role in the adaptation and survival of these wall-less monoderms. Diversity through variable genes is less clearly established among phylogenetically similar mycoplasmas, such as the Mycoplasma mycoides cluster of ruminant pathogens, which vary widely in host range and pathobiology. Using (i) genome sequences from two members of this clade, Mycoplasma capricolum subsp. capricolum and M. mycoides subsp. mycoides small colony biotype (SC), (ii) antibodies to specific peptide determinants of predicted M. capricolum subsp. capricolum gene products, and (iii) analysis of the membrane-associated proteome of M. capricolum subsp. capricolum, a novel set of six genes (vmcA to vmcF) expressing distinct Vmc (variable M. capricolum subsp. capricolum) lipoproteins is demonstrated. These occur at two separate loci in the M. capricolum subsp. capricolum genome, which shares striking overall similarity and gene synteny with the M. mycoides subsp. mycoides SC genome. Collectively, Vmc expression is noncoordinate and combinatorial, subject to a single-unit insertion/deletion in a 5 flanking dinucleotide repeat that governs expression of each vmc gene. All vmc genes share modular regions affecting expression and membrane translocation. In contrast, vmcA to vmcD genes at one locus express surface proteins with highly structured size-variable repeating domains, whereas vmcE to vmcF genes express products with short repeats devoid of predicted structure. These genes confer a distinctive, dynamic surface architecture that may represent adaptive differences within this important group of pathogens as well as exploitable diagnostic targets.Among the monoderms comprising the low-GϩC Firmicutes, Mollicutes (termed mycoplasmas in this report) represent a clade of organisms that displays both marked genome reduction and extensive phylogenetic divergence (21,52). Many of the Ͼ200 known mycoplasmal species (22,50) are obligate parasites and significant pathogens of vertebrate hosts. Their dependence on host factors for survival stems in part from an absence of genes encoding critical metabolic pathways that are present in many bacteria, a paucity of regulatory networks providing classic gene regulation in response to environmental cues and limitations imposed by the lack of genes for cell wall synthesis. In addition, and despite some examples of their growth and survival in intracellular environments (1,5,26,55), mycoplasmas generally occur in niches outside host cells. This changing milieu demands an adaptive survival stategy and implies the need in these wall-less organisms for a cell surface capable of dynamic host interactions, both opportunistic as well as defensive. Although the full range of such strategies is not known, the generation of membrane ...