Bladder cancers are biologically and clinically heterogeneous. Recent large-scale transcriptomic profiling studies focusing on life-threatening muscle-invasive cases have demonstrated a small number of molecularly distinct clusters that largely explain their heterogeneity. Similar to breast cancer, these clusters reflect intrinsic urothelial cell-type differentiation programs, including those with luminal and basal cell characteristics. Also like breast cancer, each cell-based subtype demonstrates a distinct profile with regard to its prognosis and its expression of therapeutic targets. Indeed, a number of studies suggest subtype-specific differential responses to cytotoxic chemotherapy and to therapies that inhibit a number of targets, including growth factors (EGFR, ERBB2, FGFR) and immune checkpoint (PD1, PDL1) inhibitors. Despite burgeoning evidence for important clinical implications, subtyping has yet to enter into routine clinical practice. Here we review the conceptual basis for intrinsic cell subtyping in muscle-invasive bladder cancer and discuss evidence behind proposed clinical uses for subtyping as a prognostic or predictive test. In deliberating barriers to clinical implementation, we review pitfalls associated with transcriptomic profiling and illustrate a simple immunohistochemistry (IHC)-based subtyping algorithm that may serve as a faster, less expensive alternative. Envisioned as a research tool that can easily be translated into routine pathology workflow, IHC-based profiling has the potential to more rapidly establish the utility (or lack thereof) of cell type profiling in clinical practice.
Conflict of interest statement: DrBerman has served as a paid scientific advisor to Janssen Pharmaceuticals, which manufactures erdafitinib. cancers that invade the muscular bladder wall, commonly referred to as muscle-invasive bladder cancers. This focus reflects the scarcity of molecular subtype studies identified in more superficial bladder cancers,Non-luminal-like MIBCs are often casually referred to as 'basal-like', a simplification that clearly underestimates the variety of MIBC molecular phenotypes. About two-thirds of non-luminal-like MIBCs show strong expression of basal genes including KRT5, KRT6, KRT14, CD44, CDH3, and EGFR. This molecular subtype shows relatively high levels of both stromal-