Airway vagal hypertonia is closely related to the severity of asthma; however, the mechanisms of its genesis are unclear. This study aims to prove that asthmatic airway vagal hypertonia involves neuronal Cl − dyshomeostasis. The experimental airway allergy model was prepared with ovalbumin in male adult Sprague-Dawley rats. Plethysmography was used to evaluate airway vagal response to intracisternally injected γ-aminobutyric acid (GABA). Immunofluorescent staining and Western-blot assay were used to examine the expression of microglia-specific proteins, Na +-K +-2Cl − co-transporter 1 (NKCC1), K +-Cl − co-transporter 2 (KCC2) and brain-derived nerve growth factor (BDNF) in airway vagal centers. Pulmonary inflammatory changes were examined with hematoxylin and eosin staining of lung sections and ELISA assay of ovalbumin-specific IgE in bronchoalveolar lavage fluid (BALF). The results showed that histochemically, experimental airway allergy activated microglia, upregulated NKCC1, downregulated KCC2, and increased the content of BDNF in airway vagal centers. Functionally, experimental airway allergy augmented the excitatory airway vagal response to intracisternally injected GABA, which was attenuated by intracisternally preinjected NKCC1 inhibitor bumetanide. All of the changes induced by experimental airway allergy were prevented or mitigated by chronic intracerebroventricular or intraperitoneal injection of minocycline, an inhibitor of microglia activation. These results demonstrate that experimental airway allergy augments the excitatory response of airway vagal centers to GABA, which might be the result of neuronal Cl − dyshomeostasis subsequent to microglia activation, increased BDNF release and altered expression of Cl − transporters. Cl − dyshomeostasis in airway vagal centers might contribute to the genesis of airway vagal hypertonia in asthma. Keywords: Na +-K +-2Cl − co-transporter 1/K +-Cl − co-transporter 2, asthma, microglia, bumetanide, airway vagal preganglionic neuron, minocycline Abbreviations: ACSF, artificial cerebral spinal fluid; AVPNs, airway vagal preganglionic neurons; BALF, bronchoalveolar lavage fluid; BDNF, brain-derived neurotrophic factor; C dyn , dynamic compliance of the lungs; CNS, central nervous system; CSF, cerebral spinal fluid; eNA, the external formation of the nucleus ambiguus; GABA, γ-aminobutyric acid; GAPDH, glyceraldehyde-3-phosphate dehydrogenase; IA-AVPNs, inspiratory-activated airway vagal preganglionic neurons; II-AVPNs, inspiratory-inhibited airway vagal preganglionic neurons; KCC2, K +-Cl − co-transporter 2; NA, nucleus ambiguus; NKCC1, Na +-K +-2Cl − co-transporter 1; NTS, nucleus tractus solitarius; OVA, ovalbumin; PEF, peak expiratory flow; PIF, peak inspiratory flow; R e , expiratory resistance of the airway; R i , inspiratory resistance of the airway.