Phylogeny of parasitiform mites (Acari) based on rRNA

Klompen, Hans; Lekveishvili, Mariam; Black, William C.

doi:10.1016/j.ympev.2006.10.024

Cited by 121 publications

(94 citation statements)

References 46 publications

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“…The Acari is composed of the Acariformes Figure 1: The lineage specific history of the Ixodida. Indicated are a current phylogenetic relationships for Eukaryotes (Adl, et al 2012), Metazoa , Arthropoda (Giribet and Edgecombe, 2012), Acari (Klompen et al 2007) and Ixodida (Mans, 2011;Mans et al 2015). Numbers in brackets indicate current number of species according to as updated (Mans, 2011). and the Parasitiformes, the latter divided into Opilioacarida, Holothyrida, Ixodida and Mesostigmata ( Fig.…”

Section: The Place Of Ticks In the Tree Of Lifementioning

confidence: 99%

“…The sister group to the Acari (Acariformes and Parasitiformes) has been considered to be the Ricinulei (Shultz, 2007;Wheeler and Hayashi, 1998), unresolved (Edgecombe and Legg, 2014;Giribet and Edgecombe, 2012;Klompen et al 2007), or the Palpigradi and Pycnogonida (Giribet et al 2002). Additionally, a number of morphological and molecular studies have suggested that the Acari is not monophyletic (Borner et al 2014;Dunlop, 2010;Dunlop and Selden, 2009;Garwood and Dunlop, 2014;Ovchinnikov and Masta, 2012;Pepato et al 2010;Regier et al 2010;Sharma et al 2014;Shultz, 2007; van der Hammen, 1989).…”

Section: The Ixodida and Their Relationships To Other Arachnidamentioning

confidence: 99%

“…The Parasitiformes can be divided into the Holothyrida, Ixodida, Mesostigmata and Opilioacarida (Klompen et al 2007;Lindquist et al 2009;Murrell et al 2005). Relationships between these groups have indicated a relative consensus of morphological and molecular data, with Opilioacarida being the most basal lineage, Holothyrida sharing a sister group relationship with the Ixodida and the Mesostigmata as their sister group (Klompen, 2010;Klompen et al 2015Klompen et al , 2007Lehtinen, 1991).…”

Section: The Ixodida and Their Relationships To Other Acarimentioning

confidence: 99%

“…Relationships between these groups have indicated a relative consensus of morphological and molecular data, with Opilioacarida being the most basal lineage, Holothyrida sharing a sister group relationship with the Ixodida and the Mesostigmata as their sister group (Klompen, 2010;Klompen et al 2015Klompen et al , 2007Lehtinen, 1991). Even so, a study has indicated a closer relationship between Ixodida and Mesostigmata (Burger et al 2014a).…”

Section: The Ixodida and Their Relationships To Other Acarimentioning

confidence: 99%

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Ancestral reconstruction of tick lineages

Mans

Castro

Pienaar

et al. 2016

Ticks and Tick-borne Diseases

101

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Section: The Place Of Ticks In the Tree Of Lifementioning

confidence: 99%

Section: The Ixodida and Their Relationships To Other Arachnidamentioning

confidence: 99%

Section: The Ixodida and Their Relationships To Other Acarimentioning

confidence: 99%

Section: The Ixodida and Their Relationships To Other Acarimentioning

confidence: 99%

See 2 more Smart Citations

Ancestral reconstruction of tick lineages

Mans

Castro

Pienaar

et al. 2016

Ticks and Tick-borne Diseases

101

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“…In most cases several independent PCR amplification steps need to be performed and several clones need to be sequenced, making targeting of independent genes cumbersome and increasing the probability for sequencing errors. For tick systematics these basic approaches have been extensively used (Black and Piesman, 1994;Black et al 1997;Black and Roehrdanz, 1998;Klompen et al 2000;Shao et al 2004;Shao et al 2005;Klompen et al 2007). Next-generation sequencing has been used to sequence amplified nuclear and mitochondrial PCR products (Burger et al 2012;Burger et al 2013;Xiong et al 2013;Burger et al 2014).…”

Section: Introductionmentioning

confidence: 99%

Next-generation sequencing as means to retrieve tick systematic markers, with the focus on Nuttalliella namaqua (Ixodoidea: Nuttalliellidae)

Mans

Klerk

Pienaar

et al. 2015

Ticks and Tick-borne Diseases

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Nuclear ribosomal RNA (18S and 28S rRNA) and mitochondrial genomes are commonly used in tick systematics. The ability to retrieve these markers using nextgeneration sequencing was investigated using the tick Nuttalliella namaqua. Issues related to nuclear markers may be resolved using this approach, notably, the monotypic status of N. namaqua and its basal relationship to other tick families. Four different Illumina datasets (~55 million, 100 bp reads each) were generated from a single tick specimen and assembled to give 350k-390k contigs. A genome size of ~1 Gbp was estimated with low levels of repetitive elements. Contigs (>1000 bp, >50-fold coverage) present in most assemblies (n=69), included host-derived 18S and 28S rRNA, tick and host-derived transposable elements, full-length tick 18S and 28 rRNA, the mitochondrial genome in single contig assemblies and the histone cassette.Coverage for the nuclear rRNA genes was above 1000-fold confirming previous sequencing errors in the 18S rRNA gene, thereby maintaining the monotypic status of this tick. Nuclear markers for the soft tick Argas africolumbae were also retrieved from next-generation data. Phylogenetic analysis of a concatenated 18S-28S rRNA dataset supported the grouping of N. namaqua at the base of the tick tree and the two main tick families in separate clades. This study confirmed the monotypic status of N. namaqua and its basal relationship to other tick families. Next-generation sequencing of genomic material to retrieve high quality nuclear and mitochondrial systematic markers for ticks is viable and may resolve issues around conventional sequencing errors when comparing closely related tick species.

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Acaricides

Müller¹,

Streibert²,

Farooq³

2009

Ullmann's Encyclopedia of Industrial Chemistry

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In this updated version some new and basic information has been added to Chapter 1 in order to provide the reader with some biological background about mites: their place in the animal kingdom, their classification, and characteristics of these very small animals. In addition the list of currently known, economically important mites has been updated. Since the use of predatory mites in integrated pest management is becoming increasingly important, some commercially available predatory mites are briefly described. Chapter 2 has been expanded with further information on the chemical properties of the compounds, e.g. their environmental stability, or lability, as an aid to better understanding their behavior in the environment. Chapter 3 has been supplemented with ecological data on various avian and aquatic species. The article contains sections titled: 1. Introduction 1.1. General Information 1.2. Characterization and Classification of Acari 1.3. Economically Important Mites 1.4. Life Cycle, Behavior, and Characteristics of Mites 1.5. Chemical Control of Mites 1.6. Integrated Pest Management 2. Acaricides 2.1. Antibiotic Acaricides 2.1.1. Nucleotide Analogue Acaricides 2.1.2. Macrocyclic Lactone Acaricides 2.1.2.1. Avermectin Acaricides 2.1.2.2. Milbemycin Acaricides 2.2. Bridged Diphenyl Acaricides 2.3. Carbamate and Oxime Carbamate Acaricides 2.3.1. Carbamate Acaricides 2.3.2. Oxime Carbamate Acaricides 2.4. Carbazate Acaricides 2.5. Dinitrophenol Acaricides 2.6. Formamidine Acaricides 2.7. Mite Growth Regulators 2.8. Organochlorine Acaricides 2.9. Organophosphorus Acaricides 2.9.1. Organophosphate Acaricides 2.9.2. Organothiophosphate Acaricides 2.9.3. Phosphonate Acaricides 2.9.4. Phosphoramidothioate Acaricides 2.10. Organotin Acaricides 2.11. Phenylsulfamide Acaricides 2.12. Pyrazole and Phenylpyrazole Acaricides 2.13. Pyrethroid Acaricides 2.13.1. Pyrethroid Ester Acaricides 2.13.2. Pyrethroid Ether Acaricides 2.14. Pyrrole Acaricides 2.15. Quinoxaline Acaricides 2.16. Sulfite Ester Acaricides 2.17. Unclassified Acaricides 3. Toxikology 3.1. Antibiotic Acaricides 3.1.1. Nucleotide Analogue Acaricides 3.1.2. Macrocyclic Lactone Acaricides 3.1.2.1. Avermectin Acaricides 3.1.2.2. Milbemycin Acaricides 3.2. Bridged Diphenyl Acaricides 3.3. Carbamate And Oxime Carbamate Acaricides 3.3.1. Carbamate Acaricides 3.3.2. Oxime Carbamate Acaricides 3.4. Carbazate Acaricides 3.5. Dinitrophenol Acaricides 3.6. Formamidine Acaricides 3.7. Mite Growth Regulators 3.8. Organochlorine Acaricides 3.9. Organophosphorus Acaricides 3.9.1. Organophosphate Acaricides 3.9.2. Organothiophosphate Acaricides 3.9.3. Phosphonate Acaricides 3.9.4. Phosphoramidothioate Acaricides 3.10. Organotin Acaricides 3.11. Phenylsulfamide Acaricides 3.12. Pyrazole And Phenylpyrazole Acaricides 3.13. Pyrethroid Acaricides 3.13.1. Pyrethroid Ester Acaricides 3.13.2. Pyrethroid Ether Acaricides 3.14. Pyrrole Acaricides 3.15. Quinoxaline Acaricides 3.16. Sulfite Ester Acaricides 3.17. Unclassified Acaricides References

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Phylogeny of parasitiform mites (Acari) based on rRNA

Cited by 121 publications

References 46 publications

Ancestral reconstruction of tick lineages

Ancestral reconstruction of tick lineages

Next-generation sequencing as means to retrieve tick systematic markers, with the focus on Nuttalliella namaqua (Ixodoidea: Nuttalliellidae)

Acaricides

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