Phylogeography, speciation and demographic history: Contrasting evidence from mitochondrial and nuclear markers of the Odorrana graminea sensu lato (Anura, Ranidae) in China

Chen, Zhuo; Li, Hanyu; Zhai, Xiaofei; Zhu, Yanjun; He, Yanan; Wang, Qiu-Ya; Li, Zhen; Jiang, Jianping; Xiong, Rongchuan; Chen, Xiaohong

doi:10.1016/j.ympev.2019.106701

Cited by 16 publications

(10 citation statements)

References 88 publications

Supporting

Mentioning

Contrasting

Order By: Relevance

“…Previous studies in other Asiatic species have also shown that despite having formally extensive ranges, their suitable niches contracted during the change from the LIG to the LGM, for example, the crested ibis ( N. nippon , Feng et al 2019 ) and the Jerdon’s tree frog Hyla annectans ( Wei et al 2020 ). A similar observation but with a drastic shift of the distribution range toward the south has been described for the golden snub-nosed monkey R. roxellana ( Zhou et al 2016 ), whereas some amphibians Microhyla fissipes complex ( Yuan et al 2016 ) and Odorrana graminea ( Chen et al 2020 ) presented extensive range during the LGM in Southern China. Compared with the LIG, the temperature and precipitation declined rapidly during the LGM ( Shi et al 2008 ; Zhao et al 2011 ).…”

Section: Discussionsupporting

confidence: 75%

Spatial dynamics of Chinese Muntjac related to past and future climate fluctuations

et al. 2021

View full text Add to dashboard Cite

Climate fluctuations in the past and in the future are likely to result in population expansions, shifts, or the contraction of the ecological niche of many species, and potentially leading to the changes in their geographical distributions. Prediction of suitable habitats has been developed as a useful tool for the assessment of habitat suitability and resource conservation to protect wildlife. Here, we model the ancestral demographic history of the extant modern Chinese Muntjac Muntiacus reevesi populations using approximate Bayesian computation (ABC) and used the maximum entropy model to simulate the past and predict the future spatial dynamics of the species under climate oscillations. Our results indicated that the suitable habitats for the M. reevesi shifted to the Southeast and contracted during the Last Glacial Maximum, whereas they covered a broader and more northern position in the Middle Holocene. The ABC analyses revealed that the modern M. reevesi populations diverged in the Middle Holocene coinciding with the significant contraction of the highly suitable habitat areas. Furthermore, our predictions suggest that the potentially suitable environment distribution for the species will expand under all future climate scenarios. These results indicated that the M. reevesi diverged in the recent time after the glacial period and simultaneously as its habitat’s expanded in the Middle Holocene. Furthermore, the past and future climate fluctuation triggered the change of Chinese muntjac spatial distribution, which has great influence on the Chinese muntjac’s population demographic history.

show abstract

Section: Discussionsupporting

confidence: 75%

Spatial dynamics of Chinese Muntjac related to past and future climate fluctuations

et al. 2021

View full text Add to dashboard Cite

show abstract

“…Here, we studied the gut microbiota of three Anura frogs, including Odorrana tormota , O. graminea , and Amolops wuyiensis (Figure 1 ), which commonly occur in southeast and central China (Fei et al, 2009 ). These species have been widely studied for their acoustic communication, morphology, molecular biology, and phylogeny (Chen et al, 2020 ; Fei et al, 2009 ; Feng et al, 2006 ; Shen et al, 2011 ). Although the microhabitats of these three species differ slightly (Fei et al, 2009 ), they are all commonly found on rocks near streams.…”

Section: Introductionmentioning

confidence: 99%

Comparative study on gut microbiota in three Anura frogs from a mountain stream

Chen

Liu

et al. 2022

Ecology and Evolution

Self Cite

View full text Add to dashboard Cite

show abstract

“…for population persistence and adaptive potential. Importantly, our analyses are based on mitochondrial markers, and mitonuclear discordance is known to be prevalent in phylogeographic studies due to gene flow, incomplete lineage sorting, or confounded taxonomies (e.g., Chen et al, 2020;Firneno et al, 2020). Thus, further studies on R. temporaria should include nuclear DNA markers and more extensive geographic sampling to corroborate the results presented here.…”

Section: Discussionmentioning

confidence: 70%

“…temporaria across Switzerland, which could have important implications for population persistence and adaptive potential. Importantly, our analyses are based on mitochondrial markers, and mitonuclear discordance is known to be prevalent in phylogeographic studies due to gene flow, incomplete lineage sorting, or confounded taxonomies (e.g., Chen et al, 2020 ; Firneno et al, 2020 ). Thus, further studies on R .…”

Section: Discussionmentioning

confidence: 99%

European common frog (Rana temporaria) recolonized Switzerland from multiple glacial refugia in northern Italy via trans‐ and circum‐Alpine routes

Rensburg

Robin

Phillips

et al. 2021

Ecology and Evolution

View full text Add to dashboard Cite

High mountain ranges such as the European Alps and Pyrenees were the last to deglaciate in mainland Europe during glacial minima over the last ~700 ky (Darnault et al., 2012;Ehlers et al., 2018).For taxa adapted to warm climates, the persistence and extent of Alpine ice sheets and the east-west orientation of the mountain ranges hindered recolonization from more southerly refugia in Italy and the Iberian Peninsula into Europe (Taberlet et al., 1998). Coldtolerant organisms exhibit a more complex history. Many expanded their range during glacial periods, some persisted in nunataks (e.g., ice-free rocky protrusions) within the Alps, and trans-Alpine recolonization has occurred in several species (e.g., Oak species, the common shrew, and barred grass snake, and the European stag beetle;

show abstract

Phylogeography, speciation and demographic history: Contrasting evidence from mitochondrial and nuclear markers of the Odorrana graminea sensu lato (Anura, Ranidae) in China

Cited by 16 publications

References 88 publications

Spatial dynamics of Chinese Muntjac related to past and future climate fluctuations

Spatial dynamics of Chinese Muntjac related to past and future climate fluctuations

Comparative study on gut microbiota in three Anura frogs from a mountain stream

European common frog (Rana temporaria) recolonized Switzerland from multiple glacial refugia in northern Italy via trans‐ and circum‐Alpine routes

Contact Info

Product

Resources

About