Abstract. The bacterially mediated aerobic methane oxidation (MO x ) is a key mechanism in controlling methane (CH 4 ) emissions from the world's oceans to the atmosphere. In this study, we investigated MO x in the Arctic fjord Storfjorden (Svalbard) by applying a combination of radio-tracerbased incubation assays ( 3 H-CH 4 and 14 C-CH 4 ), stable C-CH 4 isotope measurements, and molecular tools (16S rRNA gene Denaturing Gradient Gel Electrophoresis (DGGE) fingerprinting, pmoA-and mxaF gene analyses). Storfjorden is stratified in the summertime with melt water (MW) in the upper 60 m of the water column, Arctic water (ArW) between 60 and 100 m, and brine-enriched shelf water (BSW) down to 140 m. CH 4 concentrations were supersaturated with respect to the atmospheric equilibrium (about 3-4 nM) throughout the water column, increasing from ∼ 20 nM at the surface to a maximum of 72 nM at 60 m and decreasing below. MO x rate measurements at near in situ CH 4 concentrations (here measured with 3 H-CH 4 raising the ambient CH 4 pool by < 2 nM) showed a similar trend: low rates at the sea surface, increasing to a maximum of ∼ 2.3 nM day −1 at 60 m, followed by a decrease in the deeper ArW/BSW. In contrast, rate measurements with 14 C-CH 4 (incubations were spiked with ∼ 450 nM of 14 C-CH 4 , providing an estimate of the CH 4 oxidation at elevated concentration) showed comparably low turnover rates (< 1 nM day −1 ) at 60 m, and peak rates were found in ArW/BSW at ∼ 100 m water depth, concomitant with increasing 13 C values in the residual CH 4 pool. Our results indicate that the MO x community in the surface MW is adapted to relatively low CH 4 concentrations. In contrast, the activity of the deep-water MO x community is relatively low at the ambient, summertime CH 4 concentrations but has the potential to increase rapidly in response to CH 4 availability. A similar distinction between surface and deepwater MO x is also suggested by our molecular analyses. The DGGE banding patterns of 16S rRNA gene fragments of the surface MW and deep water were clearly different. A DGGE band related to the known type I MO x bacterium Methylosphaera was observed in deep BWS, but absent in surface MW. Furthermore, the Polymerase Chain Reaction (PCR) amplicons of the deep water with the two functional primers sets pmoA and mxaF showed, in contrast to those of the surface MW, additional products besides the expected one of 530 base pairs (bp). Apparently, different MO x communities have developed in the stratified water masses in Storfjorden, which is possibly related to the spatiotemporal variability in CH 4 supply to the distinct water masses.