Background-In contrast to clear associations between variants in genes participating in low-density lipoprotein metabolism and cardiovascular disease risk, such associations for high-density lipoprotein (HDL)-related genes are not well supported by recent large studies. We aimed to determine whether genetic variants at the locus encoding phospholipid transfer protein (PLTP), a protein involved in HDL remodeling, underlie altered PLTP activity, HDL particle concentration and size, and cardiovascular disease risk. Methods and Results-We assessed associations between 6 PLTP tagging single nucleotide polymorphisms and PLTP activity in 2 studies (combined nϭ384) and identified 2 variants that show reproducible associations with altered plasma PLTP activity. A gene score based on these variants is associated with lower hepatic PLTP transcription (Pϭ3.2ϫ10 Ϫ18 ) in a third study (nϭ957) and with an increased number of HDL particles of smaller size (Pϭ3.4ϫ10 Ϫ17 ) in a fourth study (nϭ3375). In a combination of 5 cardiovascular disease case-control studies (nϭ4658 cases and 11 459 controls), a higher gene score was associated with a lower cardiovascular disease risk (per-allele odds ratio, 0.94; 95% confidence interval, 0.90 to 0.98; Pϭ1.2ϫ10 Ϫ3 ; odds ratio for highest versus lowest gene score, 0.69; 95% confidence interval, 0.55 to 0.86; Pϭ1.0ϫ10 Ϫ3 ). Conclusions-A gene score based on 2 PLTP single nucleotide polymorphisms is associated with lower PLTP transcription and activity, an increased number of HDL particles, smaller HDL size, and decreased risk of cardiovascular disease. These findings indicate that PLTP is a proatherogenic entity and suggest that modulation of specific elements of HDL metabolism may offer cardiovascular benefit. (Circulation. 2010;122:470-477.)Key Words: atherosclerosis Ⅲ genetics Ⅲ lipoproteins, HDL Ⅲ PLTP protein, human C lear associations between variants in genes related to low-density lipoprotein metabolism and cardiovascular disease (CVD) risk are consistent with a causal role for low-density lipoprotein in atherosclerosis development. 1,2 Whether high-density lipoprotein (HDL) has a similar role is increasingly questioned. 3,4 Genetic association studies linking
Editorial see p 452 Clinical Perspective on p 477variation in HDL-related genes to CVD risk would positively add to the body of evidence, but such associations are not well supported by recent large studies. 1,3 One candidate Received September 29, 2009; accepted May 14, 2010. 8 In humans, plasma PLTP activity has been found to be slightly increased in diabetes mellitus, obesity, and the metabolic syndrome. 9 Additionally, several studies suggest that a higher PLTP activity is associated with an increased risk of atherosclerosis, 10 -12 but another study suggests the opposite. 13 Initially, 2 small studies revealed an association between common genetic PLTP variants and HDL cholesterol levels 14 and obesity-linked parameters. 15 However, a paucity of data exists in humans on the consequences of common variants in the...