ruptions of networks of interstitial cells of Cajal (ICC), gastrointestinal pacemakers and mediators of neurotransmission, can lead to disordered phasic contractions and peristalsis by reducing and uncoupling electrical slow waves. However, detailed analysis of the ICC network behavior has been hampered by their scarcity, limited accessibility in intact tissues, and contamination with other cell types in culture. Our goal was to develop a simple technique to purify ICC from murine gastrointestinal muscles for functional studies. We identified ICC in live small intestinal muscles or primary cell cultures by Kit immunoreactivity using fluorescent antibodies. Because this technique also labels resident macrophages nonspecifically, parallel studies were performed in which nonfluorescent Kit antibodies and macrophages labeled with fluorescent dextran were used for subtractive analysis of ICC. In both groups, Kit-positive cells were tagged with superparamagnetic antibodies and sorted on magnetic columns. Efficacy was assessed by flow cytometry. ICC enrichment from primary cultures and freshly dissociated tissues was ϳ63-fold and ϳ8-fold, respectively. Unlike the cells derived directly from tissues, cells sorted from cultures frequently yielded extensive, nearly homogenous ICC networks on reseeding. Monitoring oscillations in mitochondrial Ca 2ϩ or membrane potential by imaging revealed spontaneous rhythmicity in these networks. Cells that did not bind to the columns yielded cultures that were depleted of ICC and dominated by smooth muscle cells. In conclusion, immunomagnetic sorting of primary cultures of ICC results in relatively homogenous, functional ICC networks. This technique is less suitable for obtaining ICC from freshly dispersed cells. mouse; Kit; macrophage; pacemaking; fluorescent imaging INTERSTITIAL CELLS OF CAJAL (ICC) are specialized mesenchymal cells located within the tunica muscularis of the gastrointestinal (GI) tract that play critical roles in GI motor functions and their regulation (32). Multipolar ICC, which form two-dimensional networks in the myenteric region, on the submucosal border of the circular smooth muscle layer, and within intermuscular septa of phasic GI smooth muscles, play an essential role in phasic contractile activity and peristalsis by generating and propagating electrical slow waves (4,6,12,13,24,26, 42). Elongated or bipolar ICC, which are more loosely distributed within bundles of smooth muscle cells (where they form close contacts with varicose processes of enteric motor neurons), mediate excitatory and inhibitory neural inputs to the smooth musculature (45), may amplify slow waves (5), and contribute to vagally mediated mechanoreception (9).The discovery that ICC can be identified by expression of the receptor tyrosine kinase Kit [stem cell factor (SCF) receptor, CD117] (13, 21, 39, 42) has led to several studies on the morphology of ICC networks in human GI disorders. Damages to ICC networks have been described in congenital and acquired GI disorders including anorectal ...