Polyglutamine disease is now recognized as one of the conformational, amyloid-related diseases. In this disease, polyglutamine expansion in proteins has toxic effects on cells and also results in the formation of aggregates. Polyglutamine aggregate formation is accompanied by conversion of the polyglutamine from a soluble to an insoluble form. In yeast, the efficiency of the aggregate formation is determined by the balance of various parameters, including the length of the polyglutamine tract, the function of Hsp104, and the level of polyglutamine expression. In this study, we found that the co-expression of a long polyglutamine tract, which formed aggregates independently of the function of Hsp104, enhanced the formation of aggregates of a short polyglutamine tract in wild-type cells as well as in ⌬hsp104 mutant cells. Thus, the expression of a long polyglutamine tract would be an additional parameter determining the efficiency of aggregate formation of a short polyglutamine tract. The co-localization of aggregates of long and short polyglutamine tracts suggests the possibility that the enhancement occurs due to the seeding of aggregates of the long polyglutamine tracts.Expansion of polyglutamine repeats in a protein has now been proved to account for the pathogenesis of at least nine inherited neurodegenerative diseases, including spinobulbar muscular atrophy, Huntington's disease, spinocerebellar ataxia types 1, 2, 3, 6, 7, and 17 (SCA1, SCA2, SCA3/MJD, SCA6, SCA7, and SCA17, respectively), and dentatorubural pallidoluysian atrophy (1-4). The expression of polyglutamine repeats is sufficient to cause neurodegeneration or toxicity in model organisms and cell death in cultured cells (5-11). The clinical severity and the age of onset of disease symptoms are mainly determined by the length of the polyglutamine in the protein responsible, that is, the longer the polyglutamine, the earlier the onset, and the more severe the disease. Moreover, the deposition of aggregates that contain the expanded polyglutamine is a hallmark of the affected organs and dying cells, and the ability of the expanded polyglutamine to induce these toxic phenomena appears to be inseparably linked with its ability to form aggregates. Thus, the conformational change of the expanded polyglutamine is likely a pathogenic mechanism causing these diseases, although whether the aggregates themselves are pathogenic or not is unknown. Moreover, staining of the brain of Huntington's disease patients with Congo Red suggests that polyglutamine diseases are associated with amyloid fibrils (12).Polyglutamine aggregate formation of amyloid-like appearance has been observed in vitro (13-15). These studies indicate that aggregate formation is autonomous in vitro in the length-, concentration-, and time-dependent manner of a polyglutamine. However, in vivo, in yeast, polyglutamine aggregate formation requires the function of the molecular chaperone Hsp104, a member of the AAA ϩ superfamily, in addition to the parameters noted above (16,17). Upon induction of...