The ground state energies and structures of octamers of
poly(methyl)iminomethylene are investigated ab
initio at the 6-31G* SCF and MP2 levels and compared with those
produced by molecular mechanics (MM), using
Allinger's MM3 force field. The torsional parameters used in MM3
calculations for the dihedral angle NCCN
(φ) have been obtained from ab initio calculations of
model diimines ((E,E),
(E,Z), and (Z,Z)
N,N‘-diisopropylethanediimine], in the flexible rotor approximation. At the MM
level, bulkier substituents have been considered as
well (R = isopropyl, 1-cyclohexylethyl). Both at the ab initio
and classical level, conformations close to a 41
helix
are found to be stable, but they never are the absolute minimum.
The minimum energy geometry shows a regularly
alternating disposition of the substituents on the iminic double bonds
(syndio configuration): its backbone conformation
(dihedral angles φ) shows dimeric sections which are
alternatively trans-planar (E,E sections) and
close to ±90°
(Z,Z sections). The energy gap between the
syndio geometry and the 41 helix amounts to ∼30 kcal/mol
in the
methyl oligomer at the ab initio level vs ∼11 kcal/mol at the MM3
level. This latter value does not change
significantly
passing from methyl to isopropyl and 1-cyclohexylethyl. Also,
conformations having an inversion of the helical
sense along the chain (wormlike chains) are found to be stable
according to both calculation methods, and their
energies are comparable to those of helical conformers. CD
calculations were carried out employing an independent
systems approach. The calculated intensities of the CD bands of a
model 41 helix are much higher than what
experimentally found, while those calculated for the syndio structure
(considered as composed of a series of diiminic
units) are comparable to experiment. A negative CD band is
predicted to be associated with the n−π* transition of
the iminic chromophore in a 41 P-helix, as previously found
in the literature. The preference for nonhelical
conformers
could account for various features observed in the UV, CD, and NMR
spectra of some poly(iminomethylenes), as
reported in literature (absorption at long wavelengths, low intensity
of CD bands, chemical shift dispersion of backbone
carbons resonances).