A rhamnogalacturonan acetylesterase (RGAE) was purified to homogeneity from the filamentous fungus Aspergillus aculeatus, and the NH 2 -terminal amino acid sequence was determined. Full-length cDNAs encoding the enzyme were isolated from an A. aculeatus cDNA library using a polymerase chain reaction-generated product as a probe. The 936-base pair rha1 cDNA encodes a 250-residue precursor protein of 26,350 Da, including a 17-amino acid signal peptide. The rha1 cDNA was overexpressed in Aspergillus oryzae, a filamentous fungus that does not possess RGAE activity, and the recombinant enzyme was purified and characterized. Mass spectrometry of the native and recombinant RGAE revealed that the enzymes are heterogeneously glycosylated. In addition, the observed differences in their molecular masses, lectin binding patterns, and monosaccharide compositions indicate that the glycan moieties on the two enzymes are structurally different. The RGAE was shown to act in synergy with rhamnogalacturonase A as well as rhamnogalacturonase B from A. aculeatus in the degradation of apple pectin rhamnogalacturonan. RNA gel blot analyses indicate that the expression of rhamnogalacturonan degrading enzymes by A. aculeatus is regulated at the level of transcription and is subjected to carbon catabolite repression by glucose.Pectic polysaccharides are located predominantly in the middle lamella and primary cell wall of dicotyledonous plants (1). The main backbone in pectins can be divided into linear homogalacturonan (smooth) regions of up to 200 residues of (1,4)-linked ␣-D-galacturonic acid (GalUA) 1 and highly branched rhamnogalacturonan (hairy) regions consisting of repeatingIn general, about half of the Rha residues in the hairy regions are substituted with neutral oligosaccharides such as arabinans, galactans, and arabinogalactans. Most pectic substances are furthermore esterified with acetyl or methyl groups at some of the GalUA residues in the backbone (1, 4).Many saprophytic and plant pathogenic fungi and bacteria possess an array of extracellular enzymes involved in the degradation of plant cell wall polymers (5, 6). In the primary cell wall, the cellulose-xyloglucan framework is embedded in a matrix of pectic polysaccharides, which thereby control the access of hydrolytic enzymes to the cellulose and hemicellulose substrates (1, 7). Thus, pectinases are often the first cell wall degrading enzymes produced by plant pathogens when cultured on purified plant cell walls or during infection (8, 9). Due to the structural complexity of the pectin matrix a synergistic or sequential action of several different pectinolytic enzymes is required for efficient breakdown (5). For example, the hydrolysis of smooth regions of pectin by polygalacturonases is highly dependent upon demethylation of the homogalacturonan backbone by pectin methylesterase (5). Similarly, the degradation of rhamnogalacturonan by rhamnogalacturonases (RGases) depends on the removal of the acetyl esters from the substrate (10, 11). Thus, the presence of a rhamnogala...