2019
DOI: 10.21105/joss.01098
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portalr: an R package for summarizing and using the Portal Project Data

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Cited by 7 publications
(9 citation statements)
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“…Because the timing of phenology initiation relative to the dominant competitor is important in Carter and Rudolf's experiment (2022), we also analyzed the temporal dynamics of Dipodomys ' breeding for comparison. We used the portalr package (Christensen et al, 2019) to extract a monthly time series by species ( Dipodomys spp., C. baileyi , C. penicillatus ), treatment (Dipo+, Dipo−), and sex (male, female) of the abundance (i.e., all individuals regardless of reproductive status) and counts of only reproductive individuals. Males were considered in the reproductive state if they were recorded as scrotal (descended), recently scrotal, or had minor signs of scrotal testes.…”
Section: Methodsmentioning
confidence: 99%
“…Because the timing of phenology initiation relative to the dominant competitor is important in Carter and Rudolf's experiment (2022), we also analyzed the temporal dynamics of Dipodomys ' breeding for comparison. We used the portalr package (Christensen et al, 2019) to extract a monthly time series by species ( Dipodomys spp., C. baileyi , C. penicillatus ), treatment (Dipo+, Dipo−), and sex (male, female) of the abundance (i.e., all individuals regardless of reproductive status) and counts of only reproductive individuals. Males were considered in the reproductive state if they were recorded as scrotal (descended), recently scrotal, or had minor signs of scrotal testes.…”
Section: Methodsmentioning
confidence: 99%
“…Rodent data-We assembled a dataset on the observed total abundance and counts of reproductive C. baileyi and C. penicillatus in Portal, Arizona using the 'portalr' package (Christensen et al, 2019). We created subsets of the data for each type of plot (control and exclosure) and sex (male and female).…”
Section: Data Curation and Manipulationmentioning
confidence: 99%
“…We also performed exploratory work on the reproductive phenology of C. penicillatus at different time periods of C. baileyi establishment in the site. C. baileyi colonized the site in 1995, causing major shifts in resource use and the competitive landscape, especially for C. penicillatusErnest 2019, Diaz andErnest 2022). To assess the effect of the shift in the.…”
mentioning
confidence: 99%
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“…We calculated treatment and species-level energy use as the sum of the appropriate individuals' metabolic rates. All data were accessed using the R package portalr (Christensen et al 2019).…”
Section: Datamentioning
confidence: 99%