SummaryIt is well-known that the small intestine of rodents rapidly undergoes differentiation and maturation during the transient suckling-weaning period from postnatal days 13 to 27. In the present study, we examined the gene expression changes in the jejunum of rats during the transient suckling-weaning period by microarray analysis. In the microarray data, we found that the expressions of many genes related to digestion/absorption/ excretion of nutrients/ions, such as members of the solute carrier ( Slc ) family and ATP-binding cassette ( Abc ) subfamily, were rapidly induced during this period. Furthermore, some transcriptional factors/cofactors ( Thrsp , Ppargc1a , Klf15 and Vdr ), which are presumably important for the induction of intestinal gene expression after weaning, were rapidly induced during this period. In contrast, genes related to transport of nutrients, such as folate, zinc, fat and phosphate, which are important for early development, were highly expressed in the suckling period and then gradually decreased during weaning. These results indicate that the jejunum matures during the suckling-weaning period accompanied by changes in the expression of many genes related to digestion/absorption/excretion and some genes for transcriptional factors/cofactors. Key Words transient suckling-weaning period, jejunum, solute carrier family, ATP-binding cassette subfamily, transcriptional factors/cofactorsThe morphology of the small intestine in rodents changes dramatically during the first 2-3 wk after birth as they are gradually weaned. During this period, the diet composition changes from one with less carbohydrate (milk) to one rich in carbohydrate (solid food) ( 1 ). Several studies have already shown that the expressions of genes related to carbohydrate digestion/absorption, such as disaccharidases [sucrase-isomaltase ( Si ) and trehalase ( Treh )], which are involved in the digestion of starch/sucrose or trehalose into monosaccharides, and hexose transporters [SGLT1 ( Slc5a1 ), GLUT5 ( Slc2a5 ) and GLUT2 ( Slc2a2 )], which are involved in monosaccharide absorption from the lumen, are elevated between 2 and 3 wk after birth in rodents ( 2 -5 ). In addition, we previously reported that the gene expressions of liver-type fatty acid-binding protein [L-FABP ( Fabp1 )] and cellular retinol-binding protein type II [CRBPII ( Rbp2 )], which are involved in transporting fatty acids and vitamin A, respectively, from the lumen to enterocytes, as well as a  -oxidation rate-controlling gene [acyl-CoA oxidase ( Acox1 )], were highly expressed in the transient suckling-weaning period, and declined after weaning ( 6 , 7 ). Furthermore, the gene expression of peroxisome proliferator-activated receptor ␣ [PPAR ␣ ( Ppara )], a transcriptional factor for these genes, was associated with these gene expression changes ( 6 ).These changes during the transient suckling-weaning period may be regulated by the nutritional changes as well as hormones, such as thyroid hormone and glucocorticoid hormone, because such hormones ar...