2018
DOI: 10.7287/peerj.preprints.27392v1
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Potential use of clinical polygenic risk scores in psychiatry – ethical implications and communicating high polygenic risk

Abstract: Psychiatric disorders present distinct clinical challenges which are partly attributable to their multifactorial aetiology and the absence of laboratory tests that can be used to confirm diagnosis or predict risk. Psychiatric disorders are highly heritable, but also polygenic, with genetic risk conferred by interactions between thousands of variants of small effect that can be summarized in a polygenic risk score. We discuss four areas in which the use of polygenic risk scores in research and clinical contexts… Show more

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Cited by 10 publications
(16 citation statements)
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“…Some of these methods (P+T,LDpred and PRS-CS) require a tuning sample, a GWAS cohort with known trait status that is independent of both discovery and target samples, used to select parameters needed to generate the PGSs in the target sample. Briefly, P+T (pruning with a p-value threshold) uses the GWAS effect size estimates as SNP weights and includes independent SNPs (defined by an LD r 2 filter for a given chromosomal window distance) with association p-values lower than a threshold (chosen after application in a tuning sample). P+T is the most commonly used and basic method, and so is the bench-mark method here.…”
Section: Introductionmentioning
confidence: 99%
“…Some of these methods (P+T,LDpred and PRS-CS) require a tuning sample, a GWAS cohort with known trait status that is independent of both discovery and target samples, used to select parameters needed to generate the PGSs in the target sample. Briefly, P+T (pruning with a p-value threshold) uses the GWAS effect size estimates as SNP weights and includes independent SNPs (defined by an LD r 2 filter for a given chromosomal window distance) with association p-values lower than a threshold (chosen after application in a tuning sample). P+T is the most commonly used and basic method, and so is the bench-mark method here.…”
Section: Introductionmentioning
confidence: 99%
“…Although clinicians can facilitate teenagers’ empowerment in health contexts, studies indicate that their knowledge of genomics, especially of psychiatric genetics and gene-environment interactions, is limited [40, 41, 46, 47]. These issues are unlikely to lessen with the growing research on prediction of genetic risk for psychiatric conditions (e.g., polygenic risk scores); on the contrary, a growing body of complex information may increase the possibility of misunderstanding and misinterpretation [48]. Improving public understanding of the potential benefits of precision psychiatry and stakeholders’ psychiatric genomic knowledge will move the needle in the right direction.…”
Section: Discussionmentioning
confidence: 99%
“…However, the ability of teenagers from historically marginalized racial/ethnic communities to enjoy the benefits of translational genomic efforts is likely to be significantly different than that of White teens. As is well-established, biobank and genomic cohorts are overwhelmingly white, resulting in insufficient power to identify complex genetic interactions and polygenic risk scores for racial/ethnic minorities, including for psychiatric conditions [48]. Concurrently, distrust in the medical community has been recognized as a barrier to accessing genomic medicine among African American, Latino, and Indigenous populations [61, 62].…”
Section: Discussionmentioning
confidence: 99%
“…32 Recently, there has been a significant amount of debate about the utility and ethical implications of using PRS in psychiatry. 33,34,35,36 While some see PRS as a potential tool to help prevent and manage care for psychiatric disorders at both an individual and general population level, others question its utility at an individual level. 35 Respondents in the present study are likely some of the most knowledgeable experts about the utility and limitations of PRS in psychiatry.…”
Section: What Findings Should Be Offeredmentioning
confidence: 99%