2012
DOI: 10.1371/journal.pgen.1002711
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Prdm5 Regulates Collagen Gene Transcription by Association with RNA Polymerase II in Developing Bone

Abstract: PRDM family members are transcriptional regulators involved in tissue specific differentiation. PRDM5 has been reported to predominantly repress transcription, but a characterization of its molecular functions in a relevant biological context is lacking. We demonstrate here that Prdm5 is highly expressed in developing bones; and, by genome-wide mapping of Prdm5 occupancy in pre-osteoblastic cells, we uncover a novel and unique role for Prdm5 in targeting all mouse collagen genes as well as several SLRP proteog… Show more

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Cited by 52 publications
(77 citation statements)
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“…21 In line with previous studies, we find PRDM5 to bind a multitude of collagen genes (Supplementary Table S1). 9 In Caco-2 cells, the major collagen targeted is the epithelial COL4A1, rather than COL1A1 as reported in osteoblasts, indicating the cell type-specific target gene recognition of PRDM5. Similarly, we failed to detect the previously published binding to TWIST1 and CDK4 promoters.…”
Section: Discussionmentioning
confidence: 82%
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“…21 In line with previous studies, we find PRDM5 to bind a multitude of collagen genes (Supplementary Table S1). 9 In Caco-2 cells, the major collagen targeted is the epithelial COL4A1, rather than COL1A1 as reported in osteoblasts, indicating the cell type-specific target gene recognition of PRDM5. Similarly, we failed to detect the previously published binding to TWIST1 and CDK4 promoters.…”
Section: Discussionmentioning
confidence: 82%
“…9 Towards identifying the mechanistic basis for tumor-suppressive functions of PRDM5, ChIP-sequencing of PRDM5-bound loci in the Caco-2 colon cancer cell line was performed. Caco-2 cells are polarized epithelial cells that grow as normal enterocytes and are often used in drug discovery as models for assaying intestinal epithelial permeability.…”
Section: Discussionmentioning
confidence: 99%
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