Previous drug selection experiments resulted in the isolation of a human cytomegalovirus (CMV) UL97 phosphotransferase mutant resistant to the benzimidazole compound maribavir (1263W94), reflecting the anti-UL97 effect of this drug. Three other CMV strains were plaque purified during these experiments. These strains showed lower-grade resistance to maribavir than the UL97 mutant. Extensive DNA sequence analyses showed no changes from the baseline strain AD169 in UL97, the genes involved in DNA replication, and most structural proteins. However, changes were identified in UL27 where each strain contained a different mutation (R233S, W362R, or a combination of A406V and a stop at codon 415). The mutation at codon 415 is predicted to truncate the expressed UL27 protein by 193 codons (32% of UL27) with a loss of nuclear localization. The expression of full-length UL27 as a green fluorescent fusion protein in uninfected fibroblasts resulted in nuclear and nucleolar fluorescence, whereas cytoplasmic localization was observed when codons 1 to 415 were similarly expressed. Viable UL27 deletion mutants were created by recombination and showed slight growth attenuation and maribavir resistance in cell culture. Marker transfer experiments confirmed that UL27 mutations conferred maribavir resistance. The UL27 sequence was well conserved in a sample of 16 diverse clinical isolates. Mutation in UL27, a betaherpesvirus-specific early gene of unknown biological function, may adapt the virus for growth in the absence of UL97 activity.Human cytomegalovirus (CMV) causes tissue-invasive diseases such as pneumonia, retinitis, and gastrointestinal disease in immunosuppressed patient populations. Currently available systemic therapy involves ganciclovir, foscarnet, and cidofovir, usually used in that order and sometimes used in combination. These drugs are deficient in several respects: they may have significant adverse effects (hematologic and renal), foscarnet and cidofovir require intravenous therapy, and there is a potential for cross-resistance resulting from viral DNA polymerase mutations (5) because all three drugs ultimately target the viral DNA polymerase. Among the more promising experimental anti-CMV agents are the benzimidazole ribosides. One subset of these drugs consists of D-ribose derivatives, which inhibit CMV by antagonizing the postsynthesis cleavage of concatemeric DNA to unit-length genomes and packaging into nucleocapsids (12). Another subset of benzimidazoles is exemplified by the L-ribose derivative maribavir (1263W94). The drug is a potent inhibitor of CMV and Epstein-Barr virus, including CMV strains resistant to currently available drugs (4, 9). Maribavir has good oral bioavailability, with few limiting side effects noted in a phase I clinical trial, which showed marked reduction in CMV shedding in semen at 4 weeks in human immunodeficiency virus-infected subjects (13). The mechanism of action of maribavir does not involve inhibition of the viral DNA polymerase, and laboratory-derived mutants resistant to ma...