9An ecological consequence of climate change is the alteration of food-web structures. Species with 10 ontogenetic (age-dependent) diet variation, such as Atlantic salmon (Salmo salar), may exhibit an age-11 dependent response to food-web perturbations, which may subsequently influence the demographic structure. 12 We previously showed that age at maturity in Atlantic salmon is primarily influenced by few genomic regions 13 (vgll3 and six6), but whether these regions are linked to diet is unknown. We hypothesized that genetic 14 variation in these life history genomic regions govern age-dependent resource utilization efficiency, which 15 would subsequently influence age at maturity. To test this, we first performed stomach content analysis of 16 Atlantic salmon sampled at sea on their return migration to fresh water, followed by targeted genotyping by 17 sequencing. Here, we first showed that Atlantic salmon change their feeding strategies along their ontogeny.
18Consistent with the so-called feast and famine strategy, older age groups retained a heavier stomach content, 19 which however came at the expense of running on empty more often. Next, we presented evidence that 20 stomach fullness in Atlantic salmon is associated with six6, a gene previously shown to be potentially under 21 divergent selection and correlated with age at maturity among populations. There was no association with 22 vgll3, a gene with a large effect on sea age at maturity. Prey composition was marginally linked to both six6 23 and vgll3. Our results suggest that Atlantic salmon individuals are not as generalist as previously thought and 24 that genetic variation partly underlies resource utilization variation among individuals. Given that feeding 25 strategies differ ontogenetically, and a spatially divergent genomic region is associated with diet acquisition 26 variation, we predict populations with diverse maturation age will have diverse evolutionary responses to 27 future changes in marine food-web structures.