Stencil Lithography (SL) is a technique based on shadow mask deposition that does not require any resist processing, energy radiation or chemical solvents. This technique has been used to fabricate sub-micrometric structures, like nanodots [1] and nanowires [2]. It is suitable for patterning on substrates with high topographies, fragile structures and with materials damaged by radiation or solvents. SL also offers the potential for rapid nanopatterning of structures using the stencils several times [3]. However, SL still faces challenges for nanopatterning, like the blurring of the deposited structures due to the stencil-substrate gap [4]. Herein we show advances in the analysis, characterization and application of nanostructures deposited by SL.In this contribution, we present a quantitative study of the blurring as a function of the gap. We show the patterning and electrical characteristics of Au nanowires deposited on polymer substrates by SL. Finally, we present the fabrication of Au nanodots and their use as biosensors based on localized surface plasmon resonance (LSPR) [5]. The stencils used for these experiments consist on silicon wafers with 100 nm thick low stress silicon nitride membranes containing nanoapertures.The blurring in SL is due to the gap between stencil and substrate. To study this relation, we fabricated stencils with membranes having steps (with apertures) as shown in Figure 1.a. This allows us to have different and controlled gaps in a single evaporation with the same stencil. By depositing 60 nm of Al through nanoslits located at different steps of the membranes, nanowires were formed on the substrate. and thickness, are plotted as a function of the gap in Figure 1.f. It can be observed that for a gap of ~40µm, the blurring is about 80nm and the thickness reduced to ~50% of the nominal deposited thickness.Using normal stencils (flat membranes), we have created nanowires (NW) and nanodot arrays. By depositing 45nm of Au through stencils containing nanoslits, we fabricated Au NWs on different polymer substrates: polyimide (PI), parylene and SU-8. The nanowires are deposited between predeposited Au electrodes to allow electrical measurements. We obtained wires up to 20µm long and 80nm wide as illustrated in Figure 2. The resistance as a function of width is shown in Figure 3. The resistivity obtained is ~10 µΩcm for parylene and SU-8, and ~7.5µΩcm for PI. These values are higher than bulk value (2.5µΩcm) due to size effects (grain and surface scattering).We also used stencils with 50nm diameter holes to deposit arrays of 65nm diameter, 80nm thick Au nanodots ( Figure 4.a and b). The total size of the array is ~20µm. We measured the extinction spectra due to LSPR (Figure 4.c) for arrays with different spacing between the nanodots, showing a resonance peak at 800nm. These structures were used to perform biosensing measurements based on the shift of the LSPR peak when biomolecules are added to metallic nanostructures. As expected, Figure 4.d shows a peak shift when biotin (PLL-PEG-biotin) ...